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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181343378
OFMJ01001261
202812
Bacillota
CAT
Met
>WENV181343494
OFMJ01002314
202812
Bacillota
CAT
Met
>WENV181343141
OFMJ01000539
283807
Bacillota
TAC
Val
>WENV181343310
OFMJ01001034
37213
Bacillota
TGA
Ser
>WENV181343468
OFMJ01002040
37213
Bacillota
TGA
Ser
>WENV181343260
OFMJ01000917
144612
Bacillota
TCT
Arg
>WENV181343014
OFMJ01000270
154063
Bacillota
CGG
Pro
>WENV181343907
OFMJ01022438
154063
Bacillota
CGG
Pro
>WENV181342759
OFMJ01000003
23769
Bacillota
TAA
Leu
>WENV181342966
OFMJ01000194
23769
Bacillota
TAA
Leu
>WENV181343097
OFMJ01000465
23769
Bacillota
TAA
Leu
>WENV181343142
OFMJ01000539
23769
Bacillota
TAA
Leu
>WENV181343302
OFMJ01001010
235154
Bacillota
GTT
Asn
>WENV181343991
OFMJ01036247
235154
Bacillota
GTT
Asn
>WENV181343254
OFMJ01000859
429443
Bacillota
GCA
Cys
>WENV181343149
OFMJ01000568
59312
Bacillota
CAG
Leu
>WENV181344000
OFMJ01037831
238910
Bacillota
CTT
Lys
>WENV181343952
OFMJ01027217
235137
Bacillota
TGC
Ala
>WENV181343688
OFMJ01006788
281701
Bacillota
TGC
Ala
>WENV181343747
OFMJ01008986
338143
Bacillota
CTC
Glu
>WENV181343609
OFMJ01004545
341763
Bacillota
CTC
Glu
>WENV181343815
OFMJ01012784
341763
Bacillota
CTC
Glu
>WENV181343177
OFMJ01000637
429429
Bacillota
CCA
Trp
>WENV181343210
OFMJ01000729
429429
Bacillota
CCA
Trp
>WENV181343223
OFMJ01000793
429429
Bacillota
CCA
Trp
>WENV181343150
OFMJ01000569
313454
Bacillota
GAA
Phe
>WENV181343358
OFMJ01001202
313454
Bacillota
GAA
Phe
>WENV181343460
OFMJ01001980
313454
Bacillota
GAA
Phe
>WENV181343836
OFMJ01014714
313454
Bacillota
GAA
Phe
>WENV181342790
OFMJ01000010
41154
Bacillota
TAA
Leu
>WENV181343000
OFMJ01000254
235117
Bacillota
TAC
Val
>WENV181342953
OFMJ01000185
156937
Bacillota
GTG
His
>WENV181343002
OFMJ01000254
235079
Bacillota
GAA
Phe
>WENV181343695
OFMJ01006918
114440
Bacillota
TAG
Leu
>WENV181342939
OFMJ01000171
149041
Bacillota
GTC
Asp
>WENV181342999
OFMJ01000254
271471
Bacillota
GCC
Gly
>WENV181343003
OFMJ01000254
271471
Bacillota
GCC
Gly
>WENV181342847
OFMJ01000050
37269
Bacillota
TGA
Ser
>WENV181343354
OFMJ01001197
155089
Bacillota
CAT
Met
>WENV181343348
OFMJ01001196
287000
Bacillota
GTT
Asn
>WENV181342854
OFMJ01000061
413152
Bacillota
TCC
Gly
>WENV181343294
OFMJ01001004
348433
Bacillota
TTC
Glu
>WENV181343851
OFMJ01015681
162445
Bacillota
CAT
Met
>WENV181343853
OFMJ01015681
162445
Bacillota
CAT
Met
>WENV181343989
OFMJ01036246
201704
Bacillota
GAT
Ile
>WENV181343105
OFMJ01000477
152492
Bacillota
GGG
Pro
>WENV181343554
OFMJ01003320
152492
Bacillota
GGG
Pro
>WENV181343593
OFMJ01004275
152492
Bacillota
GGG
Pro
>WENV181342791
OFMJ01000010
147684
Bacillota
ACG
Arg
>WENV181342964
OFMJ01000194
147684
Bacillota
ACG
Arg
>WENV181343285
OFMJ01000990
263765
Bacillota
TAC
Val
>WENV181343415
OFMJ01001525
10680
Bacillota
GGA
Ser
>WENV181343063
OFMJ01000348
412387
Bacillota
GCA
Cys
>WENV181343647
OFMJ01005259
412387
Bacillota
GCA
Cys
>WENV181343648
OFMJ01005259
412387
Bacillota
GCA
Cys
>WENV181343130
OFMJ01000524
313164
Bacillota
TTT
Lys
>WENV181343132
OFMJ01000524
313164
Bacillota
TTT
Lys
>WENV181343359
OFMJ01001202
313164
Bacillota
TTT
Lys
>WENV181343949
OFMJ01026982
109476
Bacillota
TAG
Leu
>WENV181342754
OFMJ01000003
18852
Bacillota
GCT
Ser
>WENV181343290
OFMJ01000993
18852
Bacillota
GCT
Ser
>WENV181343384
OFMJ01001307
18852
Bacillota
GCT
Ser
>WENV181342941
OFMJ01000171
239832
Bacillota
TGT
Thr
>WENV181343868
OFMJ01017332
59296
Bacillota
AAG
Leu
>WENV181343605
OFMJ01004478
237846
Bacillota
GCC
Gly
>WENV181343625
OFMJ01004972
157838
Bacillota
GTC
Asp
>WENV181343970
OFMJ01033564
310822
Bacillota
CTT
Lys
>WENV181343151
OFMJ01000569
419877
Bacillota
TCC
Gly
>WENV181343590
OFMJ01004204
21693
Bacillota
GCT
Ser
>WENV181343689
OFMJ01006788
198135
Bacillota
GAT
Ile
>WENV181343681
OFMJ01006345
248965
Bacillota
GCC
Gly
>WENV181343752
OFMJ01009306
299139
Bacillota
TGC
Ala
>WENV181344021
OFMJ01046042
299139
Bacillota
TGC
Ala
>WENV181343451
OFMJ01001858
272488
Bacillota
GAA
Phe
>WENV181343565
OFMJ01003549
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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