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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181342824
OFMJ01000027
235097
Bacteroidota
TTT
Lys
>WENV181342958
OFMJ01000189
144657
Bacteroidota
CGG
Pro
>WENV181343633
OFMJ01005069
339341
Bacteroidota
GGT
Thr
>WENV181343126
OFMJ01000520
343138
Bacteroidota
CCT
Arg
>WENV181343418
OFMJ01001552
58715
Bacteroidota
GAG
Leu
>WENV181343067
OFMJ01000365
46165
Bacteroidota
TGA
Ser
>WENV181343848
OFMJ01015628
17323
Bacteroidota
GGA
Ser
>WENV181343061
OFMJ01000342
338486
Bacteroidota
CAT
Met
>WENV181343382
OFMJ01001272
338486
Bacteroidota
CAT
Met
>WENV181342961
OFMJ01000189
59689
Bacteroidota
CAG
Leu
>WENV181343939
OFMJ01025610
344692
Bacteroidota
GGT
Thr
>WENV181342877
OFMJ01000087
338124
Bacteroidota
CCG
Arg
>WENV181343226
OFMJ01000806
235203
Bacteroidota
TTT
Lys
>WENV181343068
OFMJ01000365
238121
Bacteroidota
CTT
Lys
>WENV181343069
OFMJ01000365
238121
Bacteroidota
CTT
Lys
>WENV181343086
OFMJ01000419
338132
Bacteroidota
GCA
Cys
>WENV181343603
OFMJ01004460
338132
Bacteroidota
GCA
Cys
>WENV181343070
OFMJ01000365
45423
Bacteroidota
TGA
Ser
>WENV181342923
OFMJ01000142
58714
Bacteroidota
CAA
Leu
>WENV181342838
OFMJ01000038
301449
Bacteroidota
CGG
Pro
>WENV181342936
OFMJ01000167
144933
Bacteroidota
TCT
Arg
>WENV181342825
OFMJ01000028
144656
Bacteroidota
GTG
His
>WENV181343487
OFMJ01002234
235207
Bacteroidota
CAT
Met
>WENV181343835
OFMJ01014534
235207
Bacteroidota
CAT
Met
>WENV181343173
OFMJ01000631
144659
Bacteroidota
GTG
His
>WENV181342959
OFMJ01000189
235180
Bacteroidota
CCA
Trp
>WENV181343634
OFMJ01005069
235180
Bacteroidota
CCA
Trp
>WENV181342843
OFMJ01000043
80607
Bacteroidota
GTA
Tyr
>WENV181343484
OFMJ01002182
80607
Bacteroidota
GTA
Tyr
>WENV181343098
OFMJ01000466
80614
Bacteroidota
>WENV181343621
OFMJ01004879
154643
Bacteroidota
CAT
Met
>WENV181342834
OFMJ01000030
95559
Bacteroidota
TAG
Leu
>WENV181342844
OFMJ01000044
419272
Bacteroidota
CTG
Gln
>WENV181343125
OFMJ01000520
338164
Bacteroidota
TTC
Glu
>WENV181343144
OFMJ01000540
95875
Bacteroidota
TAG
Leu
>WENV181343071
OFMJ01000374
139743
Bacteroidota
GGG
Pro
>WENV181343434
OFMJ01001746
240012
Bacteroidota
CCC
Gly
>WENV181342895
OFMJ01000103
44852
Bacteroidota
TAA
Leu
>WENV181343122
OFMJ01000513
44852
Bacteroidota
TAA
Leu
>WENV181343309
OFMJ01001033
147439
Bacteroidota
TCT
Arg
>WENV181343370
OFMJ01001242
150485
Bacteroidota
GTT
Asn
>WENV181343371
OFMJ01001242
150485
Bacteroidota
GTT
Asn
>WENV181343394
OFMJ01001385
411550
Bacteroidota
CTG
Gln
>WENV181343395
OFMJ01001385
411550
Bacteroidota
CTG
Gln
>WENV181343567
OFMJ01003571
425638
Bacteroidota
CTG
Gln
>WENV181343191
OFMJ01000680
23696
Bacteroidota
GCT
Ser
>WENV181343627
OFMJ01004988
414426
Bacteroidota
CTG
Gln
>WENV181342933
OFMJ01000163
55270
Bacteroidota
TGA
Ser
>WENV181342991
OFMJ01000233
55270
Bacteroidota
TGA
Ser
>WENV181342995
OFMJ01000241
55270
Bacteroidota
TGA
Ser
>WENV181342826
OFMJ01000028
16224
Bacteroidota
GGA
Ser
>WENV181342809
OFMJ01000022
16220
Bacteroidota
GGA
Ser
>WENV181342866
OFMJ01000067
338125
Bacteroidota
CCT
Arg
>WENV181343685
OFMJ01006545
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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