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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181366662
OFPS01009656
119475
Actinomycetota
TAA
Leu
>WENV181366675
OFPS01010213
144589
Actinomycetota
ACG
Arg
>WENV181366691
OFPS01011261
16400
Actinomycetota
GAG
Leu
>WENV181366140
OFPS01001035
201717
Actinomycetota
CTT
Lys
>WENV181366692
OFPS01011389
235092
Actinomycetota
CCG
Arg
>WENV181366887
OFPS01027797
245301
Actinomycetota
GCC
Gly
>WENV181366672
OFPS01009906
338239
Actinomycetota
TTC
Glu
>WENV181366390
OFPS01003123
16219
Actinomycetota
GCT
Ser
>WENV181366501
OFPS01004784
235174
Actinomycetota
TGC
Ala
>WENV181366740
OFPS01014339
144625
Actinomycetota
GTC
Asp
>WENV181366905
OFPS01029536
153948
Actinomycetota
GGG
Pro
>WENV181366702
OFPS01011850
145345
Actinomycetota
TAC
Val
>WENV181366910
OFPS01031006
198659
Actinomycetota
TAC
Val
>WENV181366635
OFPS01008557
413665
Actinomycetota
TTG
Gln
>WENV181367047
OFPS01070362
16223
Actinomycetota
GAG
Leu
>WENV181366686
OFPS01010852
144593
Actinomycetota
TAT
Ile
>WENV181366532
OFPS01005418
113703
Actinomycetota
TAG
Leu
>WENV181366654
OFPS01009340
45147
Actinomycetota
CGA
Ser
>WENV181366266
OFPS01001823
295695
Actinomycetota
CTC
Glu
>WENV181367090
OFPS01090134
98279
Actinomycetota
GTA
Tyr
>WENV181366267
OFPS01001823
338148
Actinomycetota
CTG
Gln
>WENV181366422
OFPS01003539
53078
Actinomycetota
GGA
Ser
>WENV181366588
OFPS01007003
237792
Actinomycetota
CCT
Arg
>WENV181366791
OFPS01017135
113702
Actinomycetota
TAA
Leu
>WENV181366549
OFPS01005790
176456
Actinomycetota
TCT
Arg
>WENV181366321
OFPS01002290
411554
Actinomycetota
CCC
Gly
>WENV181366443
OFPS01003810
113601
Actinomycetota
TAG
Leu
>WENV181366580
OFPS01006703
144595
Actinomycetota
CAA
Leu
>WENV181366574
OFPS01006444
235149
Actinomycetota
CCT
Arg
>WENV181366810
OFPS01018818
51286
Actinomycetota
TGA
Ser
>WENV181367006
OFPS01055179
414234
Actinomycetota
CTG
Gln
>WENV181366442
OFPS01003810
235121
Actinomycetota
CGT
Thr
>WENV181366724
OFPS01013334
144635
Actinomycetota
TGG
Pro
>WENV181366808
OFPS01018556
80622
Actinomycetota
CAG
Leu
>WENV181366280
OFPS01001926
163948
Actinomycetota
CAT
Met
>WENV181366933
OFPS01035151
235173
Actinomycetota
GGC
Ala
>WENV181366806
OFPS01018457
243162
Actinomycetota
GTT
Asn
>WENV181367027
OFPS01060076
278447
Actinomycetota
GTG
His
>WENV181366518
OFPS01005050
267574
Actinomycetota
CAC
Val
>WENV181366730
OFPS01014035
95593
Actinomycetota
>WENV181366760
OFPS01015385
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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