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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181391156
OFRQ01048457
241021
Alphaproteobacteria
GGC
Ala
>WENV181391110
OFRQ01034980
113700
Alphaproteobacteria
>WENV181390929
OFRQ01004806
338282
Alphaproteobacteria
GTT
Asn
>WENV181391197
OFRQ01062522
339846
Alphaproteobacteria
GAC
Val
>WENV181391202
OFRQ01065403
147879
Alphaproteobacteria
TGG
Pro
>WENV181391086
OFRQ01028639
252148
Alphaproteobacteria
TGT
Thr
>WENV181390959
OFRQ01007780
340106
Alphaproteobacteria
GCC
Gly
>WENV181390947
OFRQ01006625
348781
Alphaproteobacteria
GAA
Phe
>WENV181391206
OFRQ01066676
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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