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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181398268
OFSD01045554
235146
Actinomycetota
CGT
Thr
>WENV181397856
OFSD01008614
119475
Actinomycetota
TAA
Leu
>WENV181397672
OFSD01003900
166493
Actinomycetota
CTT
Lys
>WENV181397851
OFSD01008495
144589
Actinomycetota
ACG
Arg
>WENV181397839
OFSD01007986
37070
Actinomycetota
CGA
Ser
>WENV181398189
OFSD01034264
144600
Actinomycetota
TGG
Pro
>WENV181398370
OFSD01072607
245301
Actinomycetota
GCC
Gly
>WENV181398257
OFSD01044477
411601
Actinomycetota
CCC
Gly
>WENV181398025
OFSD01018522
162208
Actinomycetota
TAC
Val
>WENV181397489
OFSD01001695
16219
Actinomycetota
GCT
Ser
>WENV181397703
OFSD01004345
235174
Actinomycetota
TGC
Ala
>WENV181397784
OFSD01006171
235101
Actinomycetota
TTT
Lys
>WENV181398028
OFSD01019286
147732
Actinomycetota
GTC
Asp
>WENV181398213
OFSD01037370
153948
Actinomycetota
GGG
Pro
>WENV181398331
OFSD01061480
44862
Actinomycetota
CGA
Ser
>WENV181398250
OFSD01043457
254857
Actinomycetota
CCG
Arg
>WENV181398075
OFSD01022579
16223
Actinomycetota
GAG
Leu
>WENV181397650
OFSD01003582
144593
Actinomycetota
TAT
Ile
>WENV181398144
OFSD01028765
144636
Actinomycetota
GAT
Ile
>WENV181397548
OFSD01002378
243671
Actinomycetota
CTC
Glu
>WENV181397768
OFSD01005920
98279
Actinomycetota
GTA
Tyr
>WENV181397549
OFSD01002378
338148
Actinomycetota
CTG
Gln
>WENV181397831
OFSD01007808
235148
Actinomycetota
GTT
Asn
>WENV181397832
OFSD01007808
235148
Actinomycetota
GTT
Asn
>WENV181398106
OFSD01025460
176456
Actinomycetota
TCT
Arg
>WENV181398438
OFSD01091016
144825
Actinomycetota
CAT
Met
>WENV181397689
OFSD01004197
411554
Actinomycetota
CCC
Gly
>WENV181397870
OFSD01009101
113601
Actinomycetota
TAG
Leu
>WENV181397864
OFSD01008809
144595
Actinomycetota
CAA
Leu
>WENV181398287
OFSD01048152
235149
Actinomycetota
CCT
Arg
>WENV181398111
OFSD01026501
414234
Actinomycetota
CTG
Gln
>WENV181397869
OFSD01009101
235121
Actinomycetota
CGT
Thr
>WENV181397313
OFSD01000640
47164
Actinomycetota
GGA
Ser
>WENV181397781
OFSD01006127
144635
Actinomycetota
TGG
Pro
>WENV181398367
OFSD01071751
119485
Actinomycetota
TAA
Leu
>WENV181397613
OFSD01003208
80622
Actinomycetota
CAG
Leu
>WENV181397967
OFSD01013844
44851
Actinomycetota
TGA
Ser
>WENV181397704
OFSD01004345
235173
Actinomycetota
GGC
Ala
>WENV181398308
OFSD01052798
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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