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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181428302
OGCV01000005
152471
Fusobacteriota
TGG
Pro
>WENV181428355
OGCV01000210
156827
Fusobacteriota
GTC
Asp
>WENV181428340
OGCV01000157
156979
Fusobacteriota
TCT
Arg
>WENV181428367
OGCV01000297
48197
Fusobacteriota
TAA
Leu
>WENV181428500
OGCV01003433
242889
Fusobacteriota
TGT
Thr
>WENV181428506
OGCV01003563
151855
Fusobacteriota
TGC
Ala
>WENV181428502
OGCV01003433
96990
Fusobacteriota
GTA
Tyr
>WENV181428366
OGCV01000297
248710
Fusobacteriota
GTT
Asn
>WENV181428341
OGCV01000157
242887
Fusobacteriota
GTG
His
>WENV181428354
OGCV01000210
248480
Fusobacteriota
TAC
Val
>WENV181428351
OGCV01000196
114254
Fusobacteriota
TGA
Ser
>WENV181428352
OGCV01000196
17193
Fusobacteriota
GCT
Ser
>WENV181428342
OGCV01000157
248546
Fusobacteriota
TTT
Lys
>WENV181428386
OGCV01000528
156835
Fusobacteriota
CCT
Arg
>WENV181428499
OGCV01003433
415120
Fusobacteriota
GCA
Cys
>WENV181428343
OGCV01000157
113605
Fusobacteriota
TAG
Leu
>WENV181428501
OGCV01003433
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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