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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181429104
OGCX01000021
235097
Bacteroidota
TTT
Lys
>WENV181429192
OGCX01000184
235097
Bacteroidota
TTT
Lys
>WENV181429586
OGCX01026360
235102
Bacteroidota
CGT
Thr
>WENV181429252
OGCX01000486
144657
Bacteroidota
CGG
Pro
>WENV181429228
OGCX01000280
338155
Bacteroidota
CTC
Glu
>WENV181429292
OGCX01001011
343138
Bacteroidota
CCT
Arg
>WENV181429393
OGCX01002860
58715
Bacteroidota
GAG
Leu
>WENV181429387
OGCX01002591
338486
Bacteroidota
CAT
Met
>WENV181429157
OGCX01000065
415410
Bacteroidota
TTG
Gln
>WENV181429281
OGCX01000860
415410
Bacteroidota
TTG
Gln
>WENV181429492
OGCX01007294
415410
Bacteroidota
TTG
Gln
>WENV181429254
OGCX01000505
59689
Bacteroidota
CAG
Leu
>WENV181429242
OGCX01000448
20893
Bacteroidota
GGA
Ser
>WENV181429164
OGCX01000077
338124
Bacteroidota
CCG
Arg
>WENV181429411
OGCX01003266
235203
Bacteroidota
TTT
Lys
>WENV181429315
OGCX01001293
238121
Bacteroidota
CTT
Lys
>WENV181429358
OGCX01001841
126641
Bacteroidota
TAC
Val
>WENV181429097
OGCX01000013
338132
Bacteroidota
GCA
Cys
>WENV181429200
OGCX01000210
338132
Bacteroidota
GCA
Cys
>WENV181429297
OGCX01001060
338132
Bacteroidota
GCA
Cys
>WENV181429491
OGCX01007270
338132
Bacteroidota
GCA
Cys
>WENV181429280
OGCX01000835
104003
Bacteroidota
TAG
Leu
>WENV181429316
OGCX01001293
45423
Bacteroidota
TGA
Ser
>WENV181429188
OGCX01000167
193809
Bacteroidota
CAT
Met
>WENV181429137
OGCX01000042
58714
Bacteroidota
CAA
Leu
>WENV181429343
OGCX01001604
301449
Bacteroidota
CGG
Pro
>WENV181429173
OGCX01000112
144933
Bacteroidota
TCT
Arg
>WENV181429162
OGCX01000069
144656
Bacteroidota
GTG
His
>WENV181429241
OGCX01000399
235207
Bacteroidota
CAT
Met
>WENV181429445
OGCX01004601
144659
Bacteroidota
GTG
His
>WENV181429253
OGCX01000486
235180
Bacteroidota
CCA
Trp
>WENV181429466
OGCX01005830
144596
Bacteroidota
GGC
Ala
>WENV181429190
OGCX01000175
80607
Bacteroidota
GTA
Tyr
>WENV181429204
OGCX01000213
80607
Bacteroidota
GTA
Tyr
>WENV181429439
OGCX01004325
113604
Bacteroidota
>WENV181429355
OGCX01001781
80614
Bacteroidota
>WENV181429226
OGCX01000272
52358
Bacteroidota
TGA
Ser
>WENV181429234
OGCX01000341
52358
Bacteroidota
TGA
Ser
>WENV181429175
OGCX01000131
144590
Bacteroidota
GTT
Asn
>WENV181429176
OGCX01000131
144590
Bacteroidota
GTT
Asn
>WENV181429167
OGCX01000080
95559
Bacteroidota
TAG
Leu
>WENV181429121
OGCX01000030
419272
Bacteroidota
CTG
Gln
>WENV181429134
OGCX01000040
144655
Bacteroidota
GGC
Ala
>WENV181429293
OGCX01001011
338164
Bacteroidota
TTC
Glu
>WENV181429333
OGCX01001480
95875
Bacteroidota
TAG
Leu
>WENV181429537
OGCX01013403
240012
Bacteroidota
CCC
Gly
>WENV181429112
OGCX01000025
44852
Bacteroidota
TAA
Leu
>WENV181429417
OGCX01003355
147439
Bacteroidota
TCT
Arg
>WENV181429388
OGCX01002620
354570
Bacteroidota
TTC
Glu
>WENV181429230
OGCX01000317
411550
Bacteroidota
CTG
Gln
>WENV181429143
OGCX01000048
19528
Bacteroidota
GGA
Ser
>WENV181429278
OGCX01000809
50727
Bacteroidota
TGA
Ser
>WENV181429183
OGCX01000159
132360
Bacteroidota
GGG
Pro
>WENV181429275
OGCX01000777
132360
Bacteroidota
GGG
Pro
>WENV181429367
OGCX01002060
239647
Bacteroidota
TTT
Lys
>WENV181429356
OGCX01001794
19317
Bacteroidota
GGA
Ser
>WENV181429304
OGCX01001158
185921
Bacteroidota
GTC
Asp
>WENV181429227
OGCX01000280
23696
Bacteroidota
GCT
Ser
>WENV181429301
OGCX01001132
23696
Bacteroidota
GCT
Ser
>WENV181429122
OGCX01000030
16220
Bacteroidota
GGA
Ser
>WENV181429110
OGCX01000025
338125
Bacteroidota
CCT
Arg
>WENV181429178
OGCX01000136
338125
Bacteroidota
CCT
Arg
>WENV181429299
OGCX01001099
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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