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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181431285
OGDB01000019
235097
Bacteroidota
TTT
Lys
>WENV181431297
OGDB01000032
95987
Bacteroidota
CAA
Leu
>WENV181431264
OGDB01000003
339412
Bacteroidota
GGT
Thr
>WENV181431283
OGDB01000014
235102
Bacteroidota
CGT
Thr
>WENV181431322
OGDB01000084
394247
Bacteroidota
CTC
Glu
>WENV181431323
OGDB01000084
394247
Bacteroidota
CTC
Glu
>WENV181431309
OGDB01000053
413663
Bacteroidota
CTG
Gln
>WENV181431301
OGDB01000037
136244
Bacteroidota
TAC
Val
>WENV181431265
OGDB01000003
237797
Bacteroidota
CCA
Trp
>WENV181431310
OGDB01000055
436206
Bacteroidota
TTG
Gln
>WENV181431279
OGDB01000010
412479
Bacteroidota
TTG
Gln
>WENV181431270
OGDB01000005
147147
Bacteroidota
GTG
His
>WENV181431271
OGDB01000005
147147
Bacteroidota
GTG
His
>WENV181431300
OGDB01000036
338124
Bacteroidota
CCG
Arg
>WENV181431267
OGDB01000004
338132
Bacteroidota
GCA
Cys
>WENV181431280
OGDB01000010
37076
Bacteroidota
TAA
Leu
>WENV181431284
OGDB01000015
301449
Bacteroidota
CGG
Pro
>WENV181431329
OGDB01000120
141414
Bacteroidota
GGG
Pro
>WENV181431303
OGDB01000045
144656
Bacteroidota
GTG
His
>WENV181431296
OGDB01000031
235207
Bacteroidota
CAT
Met
>WENV181431390
OGDB01001216
235207
Bacteroidota
CAT
Met
>WENV181431317
OGDB01000073
80607
Bacteroidota
GTA
Tyr
>WENV181431313
OGDB01000067
144590
Bacteroidota
GTT
Asn
>WENV181431295
OGDB01000027
95559
Bacteroidota
TAG
Leu
>WENV181431337
OGDB01000147
144655
Bacteroidota
GGC
Ala
>WENV181431276
OGDB01000007
44852
Bacteroidota
TAA
Leu
>WENV181431319
OGDB01000075
150485
Bacteroidota
GTT
Asn
>WENV181431327
OGDB01000115
196394
Bacteroidota
GTC
Asp
>WENV181431328
OGDB01000115
196394
Bacteroidota
GTC
Asp
>WENV181431362
OGDB01000380
55270
Bacteroidota
TGA
Ser
>WENV181431383
OGDB01001073
55270
Bacteroidota
TGA
Ser
>WENV181431389
OGDB01001168
16224
Bacteroidota
GGA
Ser
>WENV181431294
OGDB01000026
16220
Bacteroidota
GGA
Ser
>WENV181431277
OGDB01000007
338125
Bacteroidota
CCT
Arg
>WENV181431272
OGDB01000005
313363
Bacteroidota
GAA
Phe
>WENV181431304
OGDB01000046
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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