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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181442007
OGDN01037098
119661
Verrucomicrobiota
CAA
Leu
>WENV181442151
OGDN01065414
155256
Verrucomicrobiota
TCT
Arg
>WENV181442052
OGDN01043587
345133
Verrucomicrobiota
GAC
Val
>WENV181442009
OGDN01037541
246677
Verrucomicrobiota
CTT
Lys
>WENV181442043
OGDN01042048
155264
Verrucomicrobiota
GGG
Pro
>WENV181442154
OGDN01066446
344845
Verrucomicrobiota
CTG
Gln
>WENV181441996
OGDN01036891
46246
Verrucomicrobiota
TGA
Ser
>WENV181442134
OGDN01060060
246700
Verrucomicrobiota
TTC
Glu
>WENV181442090
OGDN01049426
347038
Verrucomicrobiota
GCC
Gly
>WENV181442214
OGDN01090463
246687
Verrucomicrobiota
CGC
Ala
>WENV181442228
OGDN01096268
344841
Verrucomicrobiota
CAC
Val
>WENV181442008
OGDN01037541
344842
Verrucomicrobiota
CGT
Thr
>WENV181442191
OGDN01079728
345123
Verrucomicrobiota
TGT
Thr
>WENV181441911
OGDN01029528
345115
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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