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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181448160
OGDV01005448
196621
Bacillota
GTC
Asp
>WENV181448201
OGDV01009965
235134
Bacillota
GAA
Phe
>WENV181447983
OGDV01000139
148239
Bacillota
TCT
Arg
>WENV181448161
OGDV01005448
304022
Bacillota
GCC
Gly
>WENV181448150
OGDV01004449
59312
Bacillota
CAG
Leu
>WENV181448143
OGDV01003790
235150
Bacillota
TGC
Ala
>WENV181448191
OGDV01008264
235137
Bacillota
TGC
Ala
>WENV181448018
OGDV01000219
429429
Bacillota
CCA
Trp
>WENV181448212
OGDV01011332
313454
Bacillota
GAA
Phe
>WENV181448109
OGDV01001148
41154
Bacillota
TAA
Leu
>WENV181448163
OGDV01005519
11034
Bacillota
GGA
Ser
>WENV181448250
OGDV01022133
338149
Bacillota
CTC
Glu
>WENV181448155
OGDV01005086
245298
Bacillota
CGG
Pro
>WENV181448020
OGDV01000233
37269
Bacillota
TGA
Ser
>WENV181448199
OGDV01009802
155089
Bacillota
CAT
Met
>WENV181448202
OGDV01009965
240017
Bacillota
GCC
Gly
>WENV181448154
OGDV01005086
411547
Bacillota
CTG
Gln
>WENV181448192
OGDV01009092
235095
Bacillota
GGT
Thr
>WENV181448148
OGDV01004306
80612
Bacillota
GTA
Tyr
>WENV181448048
OGDV01000368
235127
Bacillota
TTT
Lys
>WENV181448209
OGDV01010846
144583
Bacillota
ACG
Arg
>WENV181448159
OGDV01005448
235171
Bacillota
CCA
Trp
>WENV181448158
OGDV01005387
144621
Bacillota
GTT
Asn
>WENV181448239
OGDV01019385
277200
Bacillota
GGC
Ala
>WENV181448242
OGDV01019711
58712
Bacillota
CAG
Leu
>WENV181448117
OGDV01001367
272992
Bacillota
CTT
Lys
>WENV181448134
OGDV01002671
344240
Bacillota
GCC
Gly
>WENV181448145
OGDV01003956
196632
Bacillota
GTC
Asp
>WENV181448168
OGDV01005649
144594
Bacillota
CAC
Val
>WENV181448198
OGDV01009342
338128
Bacillota
TTC
Glu
>WENV181448146
OGDV01003956
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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