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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181449627
OGDX01001145
235097
Bacteroidota
TTT
Lys
>WENV181449748
OGDX01002978
235102
Bacteroidota
CGT
Thr
>WENV181449389
OGDX01000132
144657
Bacteroidota
CGG
Pro
>WENV181449342
OGDX01000052
338155
Bacteroidota
CTC
Glu
>WENV181449911
OGDX01030409
153993
Bacteroidota
GAT
Ile
>WENV181449348
OGDX01000070
339341
Bacteroidota
GGT
Thr
>WENV181449300
OGDX01000013
343138
Bacteroidota
CCT
Arg
>WENV181449309
OGDX01000024
58715
Bacteroidota
GAG
Leu
>WENV181449292
OGDX01000012
46165
Bacteroidota
TGA
Ser
>WENV181449377
OGDX01000112
95618
Bacteroidota
TAG
Leu
>WENV181449346
OGDX01000068
338486
Bacteroidota
CAT
Met
>WENV181449403
OGDX01000158
338486
Bacteroidota
CAT
Met
>WENV181449273
OGDX01000002
411543
Bacteroidota
CTG
Gln
>WENV181449647
OGDX01001324
59689
Bacteroidota
CAG
Leu
>WENV181449650
OGDX01001344
436206
Bacteroidota
TTG
Gln
>WENV181449710
OGDX01002077
436206
Bacteroidota
TTG
Gln
>WENV181449824
OGDX01006556
436206
Bacteroidota
TTG
Gln
>WENV181449406
OGDX01000162
20893
Bacteroidota
GGA
Ser
>WENV181449359
OGDX01000086
235182
Bacteroidota
>WENV181449556
OGDX01000659
272983
Bacteroidota
CGT
Thr
>WENV181449385
OGDX01000128
338124
Bacteroidota
CCG
Arg
>WENV181449737
OGDX01002503
338124
Bacteroidota
CCG
Arg
>WENV181449288
OGDX01000009
235203
Bacteroidota
TTT
Lys
>WENV181449428
OGDX01000194
235203
Bacteroidota
TTT
Lys
>WENV181449295
OGDX01000012
238121
Bacteroidota
CTT
Lys
>WENV181449847
OGDX01010684
126641
Bacteroidota
TAC
Val
>WENV181449386
OGDX01000129
338132
Bacteroidota
GCA
Cys
>WENV181449441
OGDX01000229
338132
Bacteroidota
GCA
Cys
>WENV181449451
OGDX01000260
338132
Bacteroidota
GCA
Cys
>WENV181449605
OGDX01001003
338132
Bacteroidota
GCA
Cys
>WENV181449635
OGDX01001213
338132
Bacteroidota
GCA
Cys
>WENV181449536
OGDX01000559
144688
Bacteroidota
CAT
Met
>WENV181449296
OGDX01000012
45423
Bacteroidota
TGA
Ser
>WENV181449308
OGDX01000020
181746
Bacteroidota
GGC
Ala
>WENV181449294
OGDX01000012
58714
Bacteroidota
CAA
Leu
>WENV181449373
OGDX01000104
301449
Bacteroidota
CGG
Pro
>WENV181449277
OGDX01000004
144933
Bacteroidota
TCT
Arg
>WENV181449333
OGDX01000039
144656
Bacteroidota
GTG
His
>WENV181449365
OGDX01000096
235207
Bacteroidota
CAT
Met
>WENV181449401
OGDX01000156
235207
Bacteroidota
CAT
Met
>WENV181449421
OGDX01000186
235207
Bacteroidota
CAT
Met
>WENV181449422
OGDX01000186
235207
Bacteroidota
CAT
Met
>WENV181449461
OGDX01000288
235207
Bacteroidota
CAT
Met
>WENV181449274
OGDX01000002
143169
Bacteroidota
GGG
Pro
>WENV181449364
OGDX01000095
143169
Bacteroidota
GGG
Pro
>WENV181449546
OGDX01000607
143169
Bacteroidota
GGG
Pro
>WENV181449578
OGDX01000795
143169
Bacteroidota
GGG
Pro
>WENV181449658
OGDX01001387
143169
Bacteroidota
GGG
Pro
>WENV181449283
OGDX01000007
144659
Bacteroidota
GTG
His
>WENV181449390
OGDX01000132
235180
Bacteroidota
CCA
Trp
>WENV181449628
OGDX01001160
80607
Bacteroidota
GTA
Tyr
>WENV181449642
OGDX01001282
80607
Bacteroidota
GTA
Tyr
>WENV181449282
OGDX01000007
80614
Bacteroidota
>WENV181449396
OGDX01000147
144590
Bacteroidota
GTT
Asn
>WENV181449545
OGDX01000601
95559
Bacteroidota
TAG
Leu
>WENV181449567
OGDX01000733
144655
Bacteroidota
GGC
Ala
>WENV181449299
OGDX01000013
338164
Bacteroidota
TTC
Glu
>WENV181449293
OGDX01000012
95875
Bacteroidota
TAG
Leu
>WENV181449544
OGDX01000597
338314
Bacteroidota
CCT
Arg
>WENV181449416
OGDX01000179
139743
Bacteroidota
GGG
Pro
>WENV181449279
OGDX01000005
240012
Bacteroidota
CCC
Gly
>WENV181449354
OGDX01000078
44852
Bacteroidota
TAA
Leu
>WENV181449394
OGDX01000134
44852
Bacteroidota
TAA
Leu
>WENV181449278
OGDX01000005
147439
Bacteroidota
TCT
Arg
>WENV181449664
OGDX01001503
150485
Bacteroidota
GTT
Asn
>WENV181449806
OGDX01005388
150485
Bacteroidota
GTT
Asn
>WENV181449590
OGDX01000889
411550
Bacteroidota
CTG
Gln
>WENV181449443
OGDX01000230
425638
Bacteroidota
CTG
Gln
>WENV181449705
OGDX01001995
425638
Bacteroidota
CTG
Gln
>WENV181449336
OGDX01000044
19317
Bacteroidota
GGA
Ser
>WENV181449531
OGDX01000552
94703
Bacteroidota
GTA
Tyr
>WENV181449366
OGDX01000097
185921
Bacteroidota
GTC
Asp
>WENV181449291
OGDX01000011
139062
Bacteroidota
TGG
Pro
>WENV181449440
OGDX01000229
23696
Bacteroidota
GCT
Ser
>WENV181449302
OGDX01000016
56823
Bacteroidota
TGA
Ser
>WENV181449437
OGDX01000212
56823
Bacteroidota
TGA
Ser
>WENV181449463
OGDX01000306
56823
Bacteroidota
TGA
Ser
>WENV181449334
OGDX01000039
16224
Bacteroidota
GGA
Ser
>WENV181449372
OGDX01000101
16220
Bacteroidota
GGA
Ser
>WENV181449338
OGDX01000045
338125
Bacteroidota
CCT
Arg
>WENV181449297
OGDX01000013
235129
Bacteroidota
GCC
Gly
>WENV181449511
OGDX01000447
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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