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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181452669
OGEA01002864
24650
Bacillota
TAA
Leu
>WENV181452587
OGEA01001418
196621
Bacillota
GTC
Asp
>WENV181452630
OGEA01002068
144612
Bacillota
TCT
Arg
>WENV181452930
OGEA01032420
154063
Bacillota
CGG
Pro
>WENV181452564
OGEA01001173
267556
Bacillota
TAC
Val
>WENV181452568
OGEA01001237
267556
Bacillota
TAC
Val
>WENV181452704
OGEA01003761
235098
Bacillota
GAC
Val
>WENV181452768
OGEA01007444
235098
Bacillota
GAC
Val
>WENV181452590
OGEA01001426
338152
Bacillota
TTC
Glu
>WENV181452468
OGEA01000485
340263
Bacillota
TTC
Glu
>WENV181452442
OGEA01000407
44854
Bacillota
TGA
Ser
>WENV181452920
OGEA01026082
429443
Bacillota
GCA
Cys
>WENV181452915
OGEA01025132
246023
Bacillota
TGC
Ala
>WENV181452397
OGEA01000247
239080
Bacillota
CTG
Gln
>WENV181452529
OGEA01000858
429429
Bacillota
CCA
Trp
>WENV181452577
OGEA01001315
11034
Bacillota
GGA
Ser
>WENV181452402
OGEA01000282
235697
Bacillota
GTT
Asn
>WENV181452849
OGEA01012432
295714
Bacillota
GCC
Gly
>WENV181452484
OGEA01000539
340265
Bacillota
GCC
Gly
>WENV181452898
OGEA01021064
16266
Bacillota
GCT
Ser
>WENV181452474
OGEA01000502
338149
Bacillota
CTC
Glu
>WENV181452491
OGEA01000625
245298
Bacillota
CGG
Pro
>WENV181452459
OGEA01000469
287000
Bacillota
GTT
Asn
>WENV181452601
OGEA01001536
235078
Bacillota
TAC
Val
>WENV181452549
OGEA01001019
100326
Bacillota
GTA
Tyr
>WENV181452654
OGEA01002431
100326
Bacillota
GTA
Tyr
>WENV181452602
OGEA01001536
240017
Bacillota
GCC
Gly
>WENV181452490
OGEA01000625
411547
Bacillota
CTG
Gln
>WENV181452547
OGEA01000972
411547
Bacillota
CTG
Gln
>WENV181452723
OGEA01004444
411547
Bacillota
CTG
Gln
>WENV181452842
OGEA01011467
147684
Bacillota
ACG
Arg
>WENV181452443
OGEA01000407
4624
Bacillota
GCT
Ser
>WENV181452585
OGEA01001418
235095
Bacillota
GGT
Thr
>WENV181452588
OGEA01001418
235095
Bacillota
GGT
Thr
>WENV181452706
OGEA01003772
419639
Bacillota
GCA
Cys
>WENV181452512
OGEA01000730
411549
Bacillota
TTG
Gln
>WENV181452642
OGEA01002233
148188
Bacillota
CCG
Arg
>WENV181452709
OGEA01003958
80612
Bacillota
GTA
Tyr
>WENV181452543
OGEA01000923
256380
Bacillota
>WENV181452574
OGEA01001271
235124
Bacillota
TGG
Pro
>WENV181452690
OGEA01003146
338129
Bacillota
TGT
Thr
>WENV181452575
OGEA01001276
144583
Bacillota
ACG
Arg
>WENV181452513
OGEA01000731
247734
Bacillota
TGC
Ala
>WENV181452586
OGEA01001418
235171
Bacillota
CCA
Trp
>WENV181452394
OGEA01000243
238974
Bacillota
GAA
Phe
>WENV181452636
OGEA01002138
144621
Bacillota
GTT
Asn
>WENV181452834
OGEA01011010
243098
Bacillota
GGT
Thr
>WENV181452593
OGEA01001442
58712
Bacillota
CAG
Leu
>WENV181452707
OGEA01003872
58712
Bacillota
CAG
Leu
>WENV181452622
OGEA01001929
245296
Bacillota
CCC
Gly
>WENV181452475
OGEA01000502
272992
Bacillota
CTT
Lys
>WENV181452632
OGEA01002069
239078
Bacillota
TTT
Lys
>WENV181452705
OGEA01003772
344240
Bacillota
GCC
Gly
>WENV181452753
OGEA01006724
196632
Bacillota
GTC
Asp
>WENV181452537
OGEA01000903
144594
Bacillota
CAC
Val
>WENV181452372
OGEA01000170
414486
Bacillota
CCC
Gly
>WENV181452659
OGEA01002518
114075
Bacillota
TAG
Leu
>WENV181452638
OGEA01002193
292012
Bacillota
TGC
Ala
>WENV181452540
OGEA01000908
338128
Bacillota
TTC
Glu
>WENV181452754
OGEA01006724
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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