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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181475975
OGFE01003996
158247
Bacillota
>WENV181475782
OGFE01001607
144612
Bacillota
TCT
Arg
>WENV181476194
OGFE01014283
154063
Bacillota
CGG
Pro
>WENV181475913
OGFE01002846
235134
Bacillota
GAA
Phe
>WENV181476078
OGFE01006045
246392
Bacillota
GTT
Asn
>WENV181476263
OGFE01021719
235098
Bacillota
GAC
Val
>WENV181476137
OGFE01009222
23769
Bacillota
TAA
Leu
>WENV181475972
OGFE01003893
44854
Bacillota
TGA
Ser
>WENV181476032
OGFE01004723
241441
Bacillota
GCC
Gly
>WENV181476232
OGFE01017852
37549
Bacillota
TAA
Leu
>WENV181475718
OGFE01001228
37071
Bacillota
TGA
Ser
>WENV181476333
OGFE01033639
246023
Bacillota
TGC
Ala
>WENV181475238
OGFE01000011
59312
Bacillota
CAG
Leu
>WENV181476172
OGFE01012036
243119
Bacillota
CTT
Lys
>WENV181475324
OGFE01000050
338147
Bacillota
CTC
Glu
>WENV181475523
OGFE01000446
338147
Bacillota
CTC
Glu
>WENV181475806
OGFE01001781
338147
Bacillota
CTC
Glu
>WENV181476130
OGFE01008762
152047
Bacillota
GGG
Pro
>WENV181476095
OGFE01006959
235294
Bacillota
TGC
Ala
>WENV181476055
OGFE01005159
152512
Bacillota
CCT
Arg
>WENV181476389
OGFE01050550
419288
Bacillota
GGT
Thr
>WENV181475407
OGFE01000162
235114
Bacillota
TTT
Lys
>WENV181476322
OGFE01031261
341763
Bacillota
CTC
Glu
>WENV181475876
OGFE01002452
182792
Bacillota
GTC
Asp
>WENV181475236
OGFE01000011
44859
Bacillota
AAG
Leu
>WENV181475237
OGFE01000011
44859
Bacillota
AAG
Leu
>WENV181475976
OGFE01003999
11034
Bacillota
GGA
Ser
>WENV181476254
OGFE01020271
342736
Bacillota
TTG
Gln
>WENV181475750
OGFE01001410
16266
Bacillota
GCT
Ser
>WENV181476203
OGFE01014689
152513
Bacillota
GAC
Val
>WENV181475948
OGFE01003473
338149
Bacillota
CTC
Glu
>WENV181476390
OGFE01050992
340131
Bacillota
GTT
Asn
>WENV181476102
OGFE01007125
37551
Bacillota
CGA
Ser
>WENV181476006
OGFE01004519
413152
Bacillota
TCC
Gly
>WENV181475586
OGFE01000668
173810
Bacillota
CAT
Met
>WENV181475771
OGFE01001531
162445
Bacillota
CAT
Met
>WENV181475646
OGFE01000911
152492
Bacillota
GGG
Pro
>WENV181475550
OGFE01000518
100326
Bacillota
GTA
Tyr
>WENV181475914
OGFE01002846
240017
Bacillota
GCC
Gly
>WENV181475558
OGFE01000549
411547
Bacillota
CTG
Gln
>WENV181475556
OGFE01000543
147684
Bacillota
ACG
Arg
>WENV181475973
OGFE01003893
4624
Bacillota
GCT
Ser
>WENV181475911
OGFE01002846
263765
Bacillota
TAC
Val
>WENV181476140
OGFE01009432
412387
Bacillota
GCA
Cys
>WENV181476080
OGFE01006045
248683
Bacillota
TTT
Lys
>WENV181475546
OGFE01000484
18852
Bacillota
GCT
Ser
>WENV181475875
OGFE01002452
235095
Bacillota
GGT
Thr
>WENV181475877
OGFE01002452
235095
Bacillota
GGT
Thr
>WENV181476079
OGFE01006045
344183
Bacillota
CTG
Gln
>WENV181475674
OGFE01001026
419639
Bacillota
GCA
Cys
>WENV181475922
OGFE01002951
411549
Bacillota
TTG
Gln
>WENV181476396
OGFE01053950
152045
Bacillota
CAT
Met
>WENV181476081
OGFE01006045
243398
Bacillota
TTC
Glu
>WENV181475495
OGFE01000322
235142
Bacillota
CTT
Lys
>WENV181475603
OGFE01000728
235142
Bacillota
CTT
Lys
>WENV181476104
OGFE01007158
37588
Bacillota
TGA
Ser
>WENV181475987
OGFE01004242
148188
Bacillota
CCG
Arg
>WENV181475691
OGFE01001076
256380
Bacillota
>WENV181476168
OGFE01011575
152051
Bacillota
ACG
Arg
>WENV181475995
OGFE01004313
243401
Bacillota
CGT
Thr
>WENV181476148
OGFE01010122
235124
Bacillota
TGG
Pro
>WENV181475969
OGFE01003828
254433
Bacillota
TAC
Val
>WENV181476210
OGFE01014904
338129
Bacillota
TGT
Thr
>WENV181475814
OGFE01001915
144583
Bacillota
ACG
Arg
>WENV181476269
OGFE01022703
247734
Bacillota
TGC
Ala
>WENV181475878
OGFE01002452
235171
Bacillota
CCA
Trp
>WENV181475548
OGFE01000518
238974
Bacillota
GAA
Phe
>WENV181475818
OGFE01001972
144621
Bacillota
GTT
Asn
>WENV181475451
OGFE01000240
235113
Bacillota
GAA
Phe
>WENV181475865
OGFE01002369
277200
Bacillota
GGC
Ala
>WENV181475541
OGFE01000471
243098
Bacillota
GGT
Thr
>WENV181475970
OGFE01003888
58712
Bacillota
CAG
Leu
>WENV181475990
OGFE01004265
58712
Bacillota
CAG
Leu
>WENV181475422
OGFE01000185
344240
Bacillota
GCC
Gly
>WENV181475606
OGFE01000736
344240
Bacillota
GCC
Gly
>WENV181476089
OGFE01006598
144594
Bacillota
CAC
Val
>WENV181475543
OGFE01000472
95563
Bacillota
GTA
Tyr
>WENV181475779
OGFE01001600
272488
Bacillota
GAA
Phe
>WENV181475694
OGFE01001087
114075
Bacillota
TAG
Leu
>WENV181475743
OGFE01001337
238945
Bacillota
GCC
Gly
>WENV181475744
OGFE01001337
238945
Bacillota
GCC
Gly
>WENV181476173
OGFE01012352
338131
Bacillota
GCC
Gly
>WENV181476076
OGFE01005967
338128
Bacillota
TTC
Glu
>WENV181475599
OGFE01000719
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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