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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181475562
OGFE01000578
235097
Bacteroidota
TTT
Lys
>WENV181475808
OGFE01001809
235097
Bacteroidota
TTT
Lys
>WENV181475811
OGFE01001878
235097
Bacteroidota
TTT
Lys
>WENV181476176
OGFE01012512
235102
Bacteroidota
CGT
Thr
>WENV181475941
OGFE01003286
267954
Bacteroidota
GCC
Gly
>WENV181475576
OGFE01000624
144657
Bacteroidota
CGG
Pro
>WENV181475427
OGFE01000188
243025
Bacteroidota
CAT
Met
>WENV181475382
OGFE01000129
338155
Bacteroidota
CTC
Glu
>WENV181476251
OGFE01020253
343138
Bacteroidota
CCT
Arg
>WENV181475241
OGFE01000013
58715
Bacteroidota
GAG
Leu
>WENV181475980
OGFE01004039
58715
Bacteroidota
GAG
Leu
>WENV181475392
OGFE01000146
95618
Bacteroidota
TAG
Leu
>WENV181475321
OGFE01000048
338486
Bacteroidota
CAT
Met
>WENV181475322
OGFE01000048
338486
Bacteroidota
CAT
Met
>WENV181475499
OGFE01000336
338486
Bacteroidota
CAT
Met
>WENV181475507
OGFE01000364
338486
Bacteroidota
CAT
Met
>WENV181475981
OGFE01004067
48053
Bacteroidota
TGA
Ser
>WENV181476125
OGFE01008338
48053
Bacteroidota
TGA
Ser
>WENV181475262
OGFE01000016
415410
Bacteroidota
TTG
Gln
>WENV181475432
OGFE01000197
415410
Bacteroidota
TTG
Gln
>WENV181475224
OGFE01000006
411543
Bacteroidota
CTG
Gln
>WENV181475240
OGFE01000013
59689
Bacteroidota
CAG
Leu
>WENV181475354
OGFE01000091
59689
Bacteroidota
CAG
Leu
>WENV181476372
OGFE01046358
412479
Bacteroidota
TTG
Gln
>WENV181475457
OGFE01000250
235182
Bacteroidota
>WENV181475663
OGFE01000964
272983
Bacteroidota
CGT
Thr
>WENV181476239
OGFE01018390
338124
Bacteroidota
CCG
Arg
>WENV181475485
OGFE01000306
238121
Bacteroidota
CTT
Lys
>WENV181475389
OGFE01000140
338132
Bacteroidota
GCA
Cys
>WENV181475466
OGFE01000283
338132
Bacteroidota
GCA
Cys
>WENV181475547
OGFE01000517
338132
Bacteroidota
GCA
Cys
>WENV181475582
OGFE01000650
338132
Bacteroidota
GCA
Cys
>WENV181475622
OGFE01000749
338132
Bacteroidota
GCA
Cys
>WENV181475813
OGFE01001911
338132
Bacteroidota
GCA
Cys
>WENV181476035
OGFE01004755
338132
Bacteroidota
GCA
Cys
>WENV181475921
OGFE01002919
144688
Bacteroidota
CAT
Met
>WENV181476211
OGFE01014924
45423
Bacteroidota
TGA
Ser
>WENV181475280
OGFE01000024
181746
Bacteroidota
GGC
Ala
>WENV181475693
OGFE01001081
58714
Bacteroidota
CAA
Leu
>WENV181475222
OGFE01000005
144933
Bacteroidota
TCT
Arg
>WENV181475327
OGFE01000057
144933
Bacteroidota
TCT
Arg
>WENV181476213
OGFE01015123
144656
Bacteroidota
GTG
His
>WENV181475925
OGFE01002981
235207
Bacteroidota
CAT
Met
>WENV181475926
OGFE01002981
235207
Bacteroidota
CAT
Met
>WENV181475331
OGFE01000066
235207
Bacteroidota
CAT
Met
>WENV181475367
OGFE01000104
144659
Bacteroidota
GTG
His
>WENV181475368
OGFE01000104
144659
Bacteroidota
GTG
His
>WENV181475371
OGFE01000108
144596
Bacteroidota
GGC
Ala
>WENV181475267
OGFE01000018
80607
Bacteroidota
GTA
Tyr
>WENV181475763
OGFE01001468
80607
Bacteroidota
GTA
Tyr
>WENV181475807
OGFE01001782
80607
Bacteroidota
GTA
Tyr
>WENV181475906
OGFE01002807
80607
Bacteroidota
GTA
Tyr
>WENV181475374
OGFE01000112
80614
Bacteroidota
>WENV181475463
OGFE01000277
80614
Bacteroidota
>WENV181475662
OGFE01000959
80614
Bacteroidota
>WENV181475648
OGFE01000916
154643
Bacteroidota
CAT
Met
>WENV181476280
OGFE01023645
144590
Bacteroidota
GTT
Asn
>WENV181476281
OGFE01023645
144590
Bacteroidota
GTT
Asn
>WENV181475977
OGFE01004032
95559
Bacteroidota
TAG
Leu
>WENV181476240
OGFE01018428
95559
Bacteroidota
TAG
Leu
>WENV181476318
OGFE01030087
419272
Bacteroidota
CTG
Gln
>WENV181475729
OGFE01001293
144655
Bacteroidota
GGC
Ala
>WENV181475473
OGFE01000292
338164
Bacteroidota
TTC
Glu
>WENV181475474
OGFE01000292
338164
Bacteroidota
TTC
Glu
>WENV181475235
OGFE01000010
95875
Bacteroidota
TAG
Leu
>WENV181475347
OGFE01000079
95875
Bacteroidota
TAG
Leu
>WENV181475494
OGFE01000319
338314
Bacteroidota
CCT
Arg
>WENV181475370
OGFE01000107
240012
Bacteroidota
CCC
Gly
>WENV181475635
OGFE01000821
240012
Bacteroidota
CCC
Gly
>WENV181475955
OGFE01003523
44852
Bacteroidota
TAA
Leu
>WENV181475997
OGFE01004329
44852
Bacteroidota
TAA
Leu
>WENV181475369
OGFE01000107
147439
Bacteroidota
TCT
Arg
>WENV181476354
OGFE01037994
280513
Bacteroidota
TTT
Lys
>WENV181475927
OGFE01002984
150485
Bacteroidota
GTT
Asn
>WENV181475928
OGFE01002984
150485
Bacteroidota
GTT
Asn
>WENV181475759
OGFE01001449
411550
Bacteroidota
CTG
Gln
>WENV181475760
OGFE01001449
411550
Bacteroidota
CTG
Gln
>WENV181475223
OGFE01000006
132360
Bacteroidota
GGG
Pro
>WENV181475390
OGFE01000143
132360
Bacteroidota
GGG
Pro
>WENV181475592
OGFE01000698
132360
Bacteroidota
GGG
Pro
>WENV181475772
OGFE01001535
132360
Bacteroidota
GGG
Pro
>WENV181476238
OGFE01018273
132360
Bacteroidota
GGG
Pro
>WENV181475899
OGFE01002661
239647
Bacteroidota
TTT
Lys
>WENV181476126
OGFE01008338
19317
Bacteroidota
GGA
Ser
>WENV181475417
OGFE01000176
353927
Bacteroidota
TTC
Glu
>WENV181475381
OGFE01000129
23696
Bacteroidota
GCT
Ser
>WENV181475521
OGFE01000424
23696
Bacteroidota
GCT
Ser
>WENV181475278
OGFE01000023
414426
Bacteroidota
CTG
Gln
>WENV181475589
OGFE01000674
16224
Bacteroidota
GGA
Ser
>WENV181475884
OGFE01002488
16224
Bacteroidota
GGA
Ser
>WENV181476345
OGFE01035537
338125
Bacteroidota
CCT
Arg
>WENV181475239
OGFE01000013
235129
Bacteroidota
GCC
Gly
>WENV181475978
OGFE01004039
235129
Bacteroidota
GCC
Gly
>WENV181475600
OGFE01000720
411629
Bacteroidota
TTG
Gln
>WENV181475604
OGFE01000731
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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