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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181485198
OGFM01000600
235097
Bacteroidota
TTT
Lys
>WENV181485597
OGFM01005911
235097
Bacteroidota
TTT
Lys
>WENV181485661
OGFM01007977
235097
Bacteroidota
TTT
Lys
>WENV181485231
OGFM01000749
339412
Bacteroidota
GGT
Thr
>WENV181485311
OGFM01001209
235102
Bacteroidota
CGT
Thr
>WENV181486020
OGFM01061608
267954
Bacteroidota
GCC
Gly
>WENV181485208
OGFM01000638
237796
Bacteroidota
CGT
Thr
>WENV181485593
OGFM01005752
144657
Bacteroidota
CGG
Pro
>WENV181485068
OGFM01000136
243025
Bacteroidota
CAT
Met
>WENV181485784
OGFM01015461
243025
Bacteroidota
CAT
Met
>WENV181485252
OGFM01000874
338155
Bacteroidota
CTC
Glu
>WENV181485454
OGFM01002788
343138
Bacteroidota
CCT
Arg
>WENV181485469
OGFM01003224
46165
Bacteroidota
TGA
Ser
>WENV181486054
OGFM01072002
17323
Bacteroidota
GGA
Ser
>WENV181485651
OGFM01007602
338486
Bacteroidota
CAT
Met
>WENV181485733
OGFM01011642
338486
Bacteroidota
CAT
Met
>WENV181485149
OGFM01000354
48053
Bacteroidota
TGA
Ser
>WENV181485539
OGFM01004554
48053
Bacteroidota
TGA
Ser
>WENV181485129
OGFM01000270
413663
Bacteroidota
CTG
Gln
>WENV181485514
OGFM01004164
415410
Bacteroidota
TTG
Gln
>WENV181485255
OGFM01000895
411543
Bacteroidota
CTG
Gln
>WENV181485756
OGFM01013953
59689
Bacteroidota
CAG
Leu
>WENV181485639
OGFM01007306
179643
Bacteroidota
GTC
Asp
>WENV181485240
OGFM01000800
147147
Bacteroidota
GTG
His
>WENV181485216
OGFM01000691
155123
Bacteroidota
GTT
Asn
>WENV181485462
OGFM01003093
145504
Bacteroidota
TGT
Thr
>WENV181485488
OGFM01003706
338124
Bacteroidota
CCG
Arg
>WENV181485463
OGFM01003094
238121
Bacteroidota
CTT
Lys
>WENV181484950
OGFM01000015
338132
Bacteroidota
GCA
Cys
>WENV181485166
OGFM01000434
338132
Bacteroidota
GCA
Cys
>WENV181485228
OGFM01000738
338132
Bacteroidota
GCA
Cys
>WENV181485384
OGFM01002020
338132
Bacteroidota
GCA
Cys
>WENV181485721
OGFM01010841
144688
Bacteroidota
CAT
Met
>WENV181485464
OGFM01003094
45423
Bacteroidota
TGA
Ser
>WENV181484948
OGFM01000011
58714
Bacteroidota
CAA
Leu
>WENV181485194
OGFM01000593
235165
Bacteroidota
CCA
Trp
>WENV181485042
OGFM01000111
280660
Bacteroidota
CCA
Trp
>WENV181486005
OGFM01055280
144933
Bacteroidota
TCT
Arg
>WENV181485627
OGFM01006845
144656
Bacteroidota
GTG
His
>WENV181485438
OGFM01002578
235207
Bacteroidota
CAT
Met
>WENV181485628
OGFM01006966
144659
Bacteroidota
GTG
His
>WENV181485594
OGFM01005752
235180
Bacteroidota
CCA
Trp
>WENV181485347
OGFM01001535
144596
Bacteroidota
GGC
Ala
>WENV181485424
OGFM01002461
412235
Bacteroidota
>WENV181484987
OGFM01000045
344769
Bacteroidota
CTC
Glu
>WENV181485090
OGFM01000168
154643
Bacteroidota
CAT
Met
>WENV181485372
OGFM01001894
419272
Bacteroidota
CTG
Gln
>WENV181485493
OGFM01003846
144655
Bacteroidota
GGC
Ala
>WENV181485132
OGFM01000279
263771
Bacteroidota
CTT
Lys
>WENV181485038
OGFM01000101
338164
Bacteroidota
TTC
Glu
>WENV181485339
OGFM01001441
167013
Bacteroidota
TGG
Pro
>WENV181485274
OGFM01001068
44852
Bacteroidota
TAA
Leu
>WENV181485109
OGFM01000210
147439
Bacteroidota
TCT
Arg
>WENV181485870
OGFM01026434
280513
Bacteroidota
TTT
Lys
>WENV181485072
OGFM01000141
150485
Bacteroidota
GTT
Asn
>WENV181485230
OGFM01000749
95986
Bacteroidota
GTA
Tyr
>WENV181485484
OGFM01003624
411550
Bacteroidota
CTG
Gln
>WENV181485495
OGFM01003960
338165
Bacteroidota
GGT
Thr
>WENV181485028
OGFM01000089
132360
Bacteroidota
GGG
Pro
>WENV181485239
OGFM01000798
132360
Bacteroidota
GGG
Pro
>WENV181485431
OGFM01002502
353927
Bacteroidota
TTC
Glu
>WENV181485884
OGFM01028595
23696
Bacteroidota
GCT
Ser
>WENV181485261
OGFM01000931
414426
Bacteroidota
CTG
Gln
>WENV181484988
OGFM01000045
146764
Bacteroidota
GTC
Asp
>WENV181485086
OGFM01000156
16224
Bacteroidota
GGA
Ser
>WENV181485199
OGFM01000600
16224
Bacteroidota
GGA
Ser
>WENV181485432
OGFM01002526
16224
Bacteroidota
GGA
Ser
>WENV181485908
OGFM01032381
16220
Bacteroidota
GGA
Ser
>WENV181484980
OGFM01000039
127023
Bacteroidota
GGG
Pro
>WENV181485437
OGFM01002573
338125
Bacteroidota
CCT
Arg
>WENV181485565
OGFM01004814
338125
Bacteroidota
CCT
Arg
>WENV181485659
OGFM01007863
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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