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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181493197
OGFZ01016868
95987
Bacteroidota
CAA
Leu
>WENV181492930
OGFZ01000372
235102
Bacteroidota
CGT
Thr
>WENV181492915
OGFZ01000284
338155
Bacteroidota
CTC
Glu
>WENV181492850
OGFZ01000057
343138
Bacteroidota
CCT
Arg
>WENV181493167
OGFZ01009912
411543
Bacteroidota
CTG
Gln
>WENV181493180
OGFZ01012233
237797
Bacteroidota
CCA
Trp
>WENV181492875
OGFZ01000113
436206
Bacteroidota
TTG
Gln
>WENV181493196
OGFZ01016808
155123
Bacteroidota
GTT
Asn
>WENV181492867
OGFZ01000095
338124
Bacteroidota
CCG
Arg
>WENV181493050
OGFZ01001598
126641
Bacteroidota
TAC
Val
>WENV181493077
OGFZ01002532
338132
Bacteroidota
GCA
Cys
>WENV181492924
OGFZ01000355
193809
Bacteroidota
CAT
Met
>WENV181493206
OGFZ01018711
37076
Bacteroidota
TAA
Leu
>WENV181492968
OGFZ01000523
301449
Bacteroidota
CGG
Pro
>WENV181492996
OGFZ01000748
301449
Bacteroidota
CGG
Pro
>WENV181493058
OGFZ01001829
144933
Bacteroidota
TCT
Arg
>WENV181492965
OGFZ01000496
141414
Bacteroidota
GGG
Pro
>WENV181492978
OGFZ01000612
141414
Bacteroidota
GGG
Pro
>WENV181492830
OGFZ01000029
144656
Bacteroidota
GTG
His
>WENV181492847
OGFZ01000050
235207
Bacteroidota
CAT
Met
>WENV181493008
OGFZ01000912
144596
Bacteroidota
GGC
Ala
>WENV181492845
OGFZ01000047
80607
Bacteroidota
GTA
Tyr
>WENV181492917
OGFZ01000321
80607
Bacteroidota
GTA
Tyr
>WENV181493016
OGFZ01001034
144590
Bacteroidota
GTT
Asn
>WENV181493017
OGFZ01001034
144590
Bacteroidota
GTT
Asn
>WENV181492946
OGFZ01000411
95559
Bacteroidota
TAG
Leu
>WENV181492974
OGFZ01000568
144655
Bacteroidota
GGC
Ala
>WENV181493184
OGFZ01013310
411550
Bacteroidota
CTG
Gln
>WENV181492801
OGFZ01000001
425638
Bacteroidota
CTG
Gln
>WENV181493024
OGFZ01001211
425638
Bacteroidota
CTG
Gln
>WENV181493090
OGFZ01003925
185921
Bacteroidota
GTC
Asp
>WENV181492914
OGFZ01000284
23696
Bacteroidota
GCT
Ser
>WENV181493181
OGFZ01012708
412236
Bacteroidota
CCC
Gly
>WENV181492899
OGFZ01000194
55270
Bacteroidota
TGA
Ser
>WENV181493037
OGFZ01001339
55270
Bacteroidota
TGA
Ser
>WENV181492831
OGFZ01000029
16224
Bacteroidota
GGA
Ser
>WENV181492970
OGFZ01000536
151960
Bacteroidota
GGC
Ala
>WENV181492889
OGFZ01000146
16220
Bacteroidota
GGA
Ser
>WENV181492868
OGFZ01000098
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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