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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181500049
OGGH01000044
235097
Bacteroidota
TTT
Lys
>WENV181500514
OGGH01001948
235097
Bacteroidota
TTT
Lys
>WENV181500637
OGGH01004841
235102
Bacteroidota
CGT
Thr
>WENV181500086
OGGH01000087
267954
Bacteroidota
GCC
Gly
>WENV181500375
OGGH01000839
267954
Bacteroidota
GCC
Gly
>WENV181500076
OGGH01000071
144657
Bacteroidota
CGG
Pro
>WENV181500228
OGGH01000284
243025
Bacteroidota
CAT
Met
>WENV181500274
OGGH01000416
243025
Bacteroidota
CAT
Met
>WENV181500451
OGGH01001249
339341
Bacteroidota
GGT
Thr
>WENV181500871
OGGH01014329
343138
Bacteroidota
CCT
Arg
>WENV181500012
OGGH01000024
58715
Bacteroidota
GAG
Leu
>WENV181500962
OGGH01023395
46165
Bacteroidota
TGA
Ser
>WENV181500889
OGGH01016004
95618
Bacteroidota
TAG
Leu
>WENV181500268
OGGH01000402
338486
Bacteroidota
CAT
Met
>WENV181500269
OGGH01000402
338486
Bacteroidota
CAT
Met
>WENV181500132
OGGH01000131
48053
Bacteroidota
TGA
Ser
>WENV181500245
OGGH01000329
48053
Bacteroidota
TGA
Ser
>WENV181500382
OGGH01000874
48053
Bacteroidota
TGA
Ser
>WENV181500516
OGGH01001970
48053
Bacteroidota
TGA
Ser
>WENV181500281
OGGH01000433
48053
Bacteroidota
TGA
Ser
>WENV181500264
OGGH01000394
48053
Bacteroidota
TGA
Ser
>WENV181500876
OGGH01015129
415410
Bacteroidota
TTG
Gln
>WENV181500138
OGGH01000138
415410
Bacteroidota
TTG
Gln
>WENV181500530
OGGH01002171
415410
Bacteroidota
TTG
Gln
>WENV181500820
OGGH01011953
411543
Bacteroidota
CTG
Gln
>WENV181501131
OGGH01055004
237797
Bacteroidota
CCA
Trp
>WENV181500926
OGGH01019509
59689
Bacteroidota
CAG
Leu
>WENV181500544
OGGH01002427
179643
Bacteroidota
GTC
Asp
>WENV181500292
OGGH01000465
80835
Bacteroidota
GTA
Tyr
>WENV181500963
OGGH01023395
344692
Bacteroidota
GGT
Thr
>WENV181500170
OGGH01000172
341950
Bacteroidota
>WENV181500614
OGGH01004100
338124
Bacteroidota
CCG
Arg
>WENV181500141
OGGH01000144
148575
Bacteroidota
CAT
Met
>WENV181500405
OGGH01000967
238121
Bacteroidota
CTT
Lys
>WENV181500406
OGGH01000967
238121
Bacteroidota
CTT
Lys
>WENV181500111
OGGH01000109
126641
Bacteroidota
TAC
Val
>WENV181500145
OGGH01000151
126641
Bacteroidota
TAC
Val
>WENV181500159
OGGH01000166
338132
Bacteroidota
GCA
Cys
>WENV181500210
OGGH01000240
338132
Bacteroidota
GCA
Cys
>WENV181500338
OGGH01000619
338132
Bacteroidota
GCA
Cys
>WENV181500430
OGGH01001078
338132
Bacteroidota
GCA
Cys
>WENV181500658
OGGH01005216
338132
Bacteroidota
GCA
Cys
>WENV181500728
OGGH01007802
144688
Bacteroidota
CAT
Met
>WENV181500257
OGGH01000348
280660
Bacteroidota
CCA
Trp
>WENV181500174
OGGH01000179
144933
Bacteroidota
TCT
Arg
>WENV181500175
OGGH01000180
144933
Bacteroidota
TCT
Arg
>WENV181500541
OGGH01002337
144933
Bacteroidota
TCT
Arg
>WENV181500718
OGGH01007219
144656
Bacteroidota
GTG
His
>WENV181500440
OGGH01001171
235207
Bacteroidota
CAT
Met
>WENV181500907
OGGH01018058
144659
Bacteroidota
GTG
His
>WENV181500803
OGGH01010893
144596
Bacteroidota
GGC
Ala
>WENV181500212
OGGH01000252
80607
Bacteroidota
GTA
Tyr
>WENV181500134
OGGH01000133
80614
Bacteroidota
>WENV181500369
OGGH01000769
80614
Bacteroidota
>WENV181500450
OGGH01001249
80614
Bacteroidota
>WENV181500147
OGGH01000153
154643
Bacteroidota
CAT
Met
>WENV181500509
OGGH01001873
95559
Bacteroidota
TAG
Leu
>WENV181500815
OGGH01011510
419272
Bacteroidota
CTG
Gln
>WENV181500582
OGGH01002919
144655
Bacteroidota
GGC
Ala
>WENV181500639
OGGH01004852
338164
Bacteroidota
TTC
Glu
>WENV181500204
OGGH01000223
95875
Bacteroidota
TAG
Leu
>WENV181500063
OGGH01000061
151121
Bacteroidota
CAT
Met
>WENV181500994
OGGH01025991
338314
Bacteroidota
CCT
Arg
>WENV181500239
OGGH01000302
240012
Bacteroidota
CCC
Gly
>WENV181500753
OGGH01008473
147439
Bacteroidota
TCT
Arg
>WENV181500050
OGGH01000045
280513
Bacteroidota
TTT
Lys
>WENV181500664
OGGH01005420
280513
Bacteroidota
TTT
Lys
>WENV181500488
OGGH01001636
132360
Bacteroidota
GGG
Pro
>WENV181500495
OGGH01001711
132360
Bacteroidota
GGG
Pro
>WENV181500587
OGGH01002986
132360
Bacteroidota
GGG
Pro
>WENV181500613
OGGH01004089
132360
Bacteroidota
GGG
Pro
>WENV181500192
OGGH01000213
239647
Bacteroidota
TTT
Lys
>WENV181500254
OGGH01000337
239647
Bacteroidota
TTT
Lys
>WENV181500265
OGGH01000394
19317
Bacteroidota
GGA
Ser
>WENV181500288
OGGH01000456
19317
Bacteroidota
GGA
Ser
>WENV181500029
OGGH01000029
353927
Bacteroidota
TTC
Glu
>WENV181499987
OGGH01000011
414426
Bacteroidota
CTG
Gln
>WENV181500507
OGGH01001850
16224
Bacteroidota
GGA
Ser
>WENV181500104
OGGH01000101
151960
Bacteroidota
GGC
Ala
>WENV181500592
OGGH01003245
16220
Bacteroidota
GGA
Ser
>WENV181500505
OGGH01001826
338125
Bacteroidota
CCT
Arg
>WENV181500010
OGGH01000024
235129
Bacteroidota
GCC
Gly
>WENV181500201
OGGH01000218
235129
Bacteroidota
GCC
Gly
>WENV181500202
OGGH01000218
235129
Bacteroidota
GCC
Gly
>WENV181500326
OGGH01000547
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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