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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181510866
OGGS01000007
24650
Bacillota
TAA
Leu
>WENV181511153
OGGS01000405
243647
Bacillota
TTT
Lys
>WENV181511337
OGGS01001068
16842
Bacillota
CGA
Ser
>WENV181511379
OGGS01001352
309417
Bacillota
GGC
Ala
>WENV181511661
OGGS01004768
309417
Bacillota
GGC
Ala
>WENV181511704
OGGS01005644
309417
Bacillota
GGC
Ala
>WENV181511358
OGGS01001177
144612
Bacillota
TCT
Arg
>WENV181511475
OGGS01002138
144612
Bacillota
TCT
Arg
>WENV181511536
OGGS01002746
144612
Bacillota
TCT
Arg
>WENV181511763
OGGS01007463
144612
Bacillota
TCT
Arg
>WENV181511374
OGGS01001314
235134
Bacillota
GAA
Phe
>WENV181510983
OGGS01000107
338152
Bacillota
TTC
Glu
>WENV181512087
OGGS01047502
148239
Bacillota
TCT
Arg
>WENV181511168
OGGS01000434
44854
Bacillota
TGA
Ser
>WENV181511361
OGGS01001214
44854
Bacillota
TGA
Ser
>WENV181511565
OGGS01003071
44854
Bacillota
TGA
Ser
>WENV181511849
OGGS01010857
425593
Bacillota
CCC
Gly
>WENV181511789
OGGS01008303
37549
Bacillota
TAA
Leu
>WENV181511092
OGGS01000275
37071
Bacillota
TGA
Ser
>WENV181512058
OGGS01035323
246023
Bacillota
TGC
Ala
>WENV181511872
OGGS01012686
307003
Bacillota
TGC
Ala
>WENV181511917
OGGS01017179
59312
Bacillota
CAG
Leu
>WENV181511999
OGGS01027026
193585
Bacillota
CGG
Pro
>WENV181511203
OGGS01000524
239080
Bacillota
CTG
Gln
>WENV181511874
OGGS01013268
243119
Bacillota
CTT
Lys
>WENV181510922
OGGS01000033
338147
Bacillota
CTC
Glu
>WENV181510944
OGGS01000060
338147
Bacillota
CTC
Glu
>WENV181511276
OGGS01000731
338147
Bacillota
CTC
Glu
>WENV181511836
OGGS01010595
235150
Bacillota
TGC
Ala
>WENV181511732
OGGS01006580
155273
Bacillota
CAT
Met
>WENV181511689
OGGS01005457
16820
Bacillota
GCT
Ser
>WENV181511154
OGGS01000405
391536
Bacillota
TTC
Glu
>WENV181511726
OGGS01006341
152512
Bacillota
CCT
Arg
>WENV181511696
OGGS01005536
152459
Bacillota
GTC
Asp
>WENV181511012
OGGS01000146
235114
Bacillota
TTT
Lys
>WENV181511363
OGGS01001219
429429
Bacillota
CCA
Trp
>WENV181511751
OGGS01007172
41154
Bacillota
TAA
Leu
>WENV181511916
OGGS01017179
44859
Bacillota
AAG
Leu
>WENV181511388
OGGS01001390
16834
Bacillota
GCT
Ser
>WENV181511311
OGGS01000939
11034
Bacillota
GGA
Ser
>WENV181511429
OGGS01001806
11034
Bacillota
GGA
Ser
>WENV181511433
OGGS01001834
11034
Bacillota
GGA
Ser
>WENV181511142
OGGS01000379
239076
Bacillota
GAA
Phe
>WENV181512000
OGGS01027026
10943
Bacillota
GGA
Ser
>WENV181511312
OGGS01000941
114002
Bacillota
CAA
Leu
>WENV181511187
OGGS01000490
37437
Bacillota
TAA
Leu
>WENV181511426
OGGS01001795
235079
Bacillota
GAA
Phe
>WENV181511451
OGGS01001936
296878
Bacillota
GTT
Asn
>WENV181511863
OGGS01011522
173314
Bacillota
GAT
Ile
>WENV181511155
OGGS01000405
243612
Bacillota
TAC
Val
>WENV181512008
OGGS01028654
316443
Bacillota
GTC
Asp
>WENV181511089
OGGS01000266
199366
Bacillota
CAT
Met
>WENV181511985
OGGS01023647
152513
Bacillota
GAC
Val
>WENV181511189
OGGS01000490
81382
Bacillota
GAG
Leu
>WENV181511489
OGGS01002298
245298
Bacillota
CGG
Pro
>WENV181511540
OGGS01002780
245298
Bacillota
CGG
Pro
>WENV181511611
OGGS01003516
245298
Bacillota
CGG
Pro
>WENV181511216
OGGS01000547
37269
Bacillota
TGA
Ser
>WENV181511605
OGGS01003393
169968
Bacillota
CAT
Met
>WENV181512057
OGGS01035323
201704
Bacillota
GAT
Ile
>WENV181511025
OGGS01000155
81373
Bacillota
GTA
Tyr
>WENV181511315
OGGS01000943
147135
Bacillota
ACG
Arg
>WENV181512064
OGGS01037584
153911
Bacillota
GAT
Ile
>WENV181511010
OGGS01000144
100326
Bacillota
GTA
Tyr
>WENV181512088
OGGS01047502
144610
Bacillota
GTG
His
>WENV181511375
OGGS01001314
240017
Bacillota
GCC
Gly
>WENV181511129
OGGS01000351
411547
Bacillota
CTG
Gln
>WENV181511466
OGGS01002046
411547
Bacillota
CTG
Gln
>WENV181511488
OGGS01002298
411547
Bacillota
CTG
Gln
>WENV181511539
OGGS01002780
411547
Bacillota
CTG
Gln
>WENV181511610
OGGS01003516
411547
Bacillota
CTG
Gln
>WENV181511169
OGGS01000434
4624
Bacillota
GCT
Ser
>WENV181511362
OGGS01001214
4624
Bacillota
GCT
Ser
>WENV181511566
OGGS01003071
4624
Bacillota
GCT
Ser
>WENV181512010
OGGS01028654
109476
Bacillota
TAG
Leu
>WENV181511453
OGGS01001936
248683
Bacillota
TTT
Lys
>WENV181511348
OGGS01001139
235095
Bacillota
GGT
Thr
>WENV181511594
OGGS01003233
235095
Bacillota
GGT
Thr
>WENV181511963
OGGS01021609
235095
Bacillota
GGT
Thr
>WENV181511452
OGGS01001936
344183
Bacillota
CTG
Gln
>WENV181511788
OGGS01008303
419945
Bacillota
GCA
Cys
>WENV181511543
OGGS01002844
194150
Bacillota
TGG
Pro
>WENV181511163
OGGS01000423
96694
Bacillota
TAG
Leu
>WENV181510913
OGGS01000028
239079
Bacillota
TAC
Val
>WENV181511404
OGGS01001565
411549
Bacillota
TTG
Gln
>WENV181511473
OGGS01002120
411549
Bacillota
TTG
Gln
>WENV181511454
OGGS01001936
243398
Bacillota
TTC
Glu
>WENV181511191
OGGS01000504
235142
Bacillota
CTT
Lys
>WENV181511477
OGGS01002147
148188
Bacillota
CCG
Arg
>WENV181511513
OGGS01002500
148188
Bacillota
CCG
Arg
>WENV181511634
OGGS01004367
148188
Bacillota
CCG
Arg
>WENV181511639
OGGS01004415
148188
Bacillota
CCG
Arg
>WENV181511416
OGGS01001681
80612
Bacillota
GTA
Tyr
>WENV181511245
OGGS01000635
235197
Bacillota
GTC
Asp
>WENV181511151
OGGS01000405
368876
Bacillota
GCC
Gly
>WENV181511724
OGGS01006210
152051
Bacillota
ACG
Arg
>WENV181511271
OGGS01000709
298620
Bacillota
CAT
Met
>WENV181511354
OGGS01001157
235124
Bacillota
TGG
Pro
>WENV181511759
OGGS01007408
235124
Bacillota
TGG
Pro
>WENV181511799
OGGS01008758
235124
Bacillota
TGG
Pro
>WENV181511859
OGGS01011239
235124
Bacillota
TGG
Pro
>WENV181511083
OGGS01000256
241526
Bacillota
CTT
Lys
>WENV181511215
OGGS01000545
338129
Bacillota
TGT
Thr
>WENV181511553
OGGS01002939
338129
Bacillota
TGT
Thr
>WENV181511422
OGGS01001763
436750
Bacillota
TCC
Gly
>WENV181511572
OGGS01003117
243613
Bacillota
GTG
His
>WENV181511326
OGGS01000980
144583
Bacillota
ACG
Arg
>WENV181511098
OGGS01000291
247734
Bacillota
TGC
Ala
>WENV181511484
OGGS01002282
238974
Bacillota
GAA
Phe
>WENV181511468
OGGS01002052
144621
Bacillota
GTT
Asn
>WENV181511582
OGGS01003149
144621
Bacillota
GTT
Asn
>WENV181511011
OGGS01000146
235113
Bacillota
GAA
Phe
>WENV181511810
OGGS01009194
277200
Bacillota
GGC
Ala
>WENV181511442
OGGS01001890
152491
Bacillota
CAT
Met
>WENV181511290
OGGS01000813
58712
Bacillota
CAG
Leu
>WENV181511415
OGGS01001681
58712
Bacillota
CAG
Leu
>WENV181511423
OGGS01001763
144762
Bacillota
TCT
Arg
>WENV181511462
OGGS01002034
245296
Bacillota
CCC
Gly
>WENV181511438
OGGS01001890
273029
Bacillota
TGT
Thr
>WENV181511338
OGGS01001080
344240
Bacillota
GCC
Gly
>WENV181511441
OGGS01001890
281472
Bacillota
GGT
Thr
>WENV181511886
OGGS01014428
196632
Bacillota
GTC
Asp
>WENV181511309
OGGS01000933
144594
Bacillota
CAC
Val
>WENV181511399
OGGS01001479
144594
Bacillota
CAC
Val
>WENV181511180
OGGS01000473
95563
Bacillota
GTA
Tyr
>WENV181511071
OGGS01000217
338127
Bacillota
TTG
Gln
>WENV181511322
OGGS01000964
413657
Bacillota
CCC
Gly
>WENV181511188
OGGS01000490
81598
Bacillota
CAG
Leu
>WENV181511486
OGGS01002282
114075
Bacillota
TAG
Leu
>WENV181511294
OGGS01000824
384950
Bacillota
GCC
Gly
>WENV181511152
OGGS01000405
287034
Bacillota
GTT
Asn
>WENV181511573
OGGS01003117
343027
Bacillota
TTG
Gln
>WENV181511495
OGGS01002335
338128
Bacillota
TTC
Glu
>WENV181511575
OGGS01003127
338128
Bacillota
TTC
Glu
>WENV181511887
OGGS01014428
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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