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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181513455
OGGU01005963
196621
Bacillota
GTC
Asp
>WENV181513835
OGGU01040136
155958
Bacillota
GAT
Ile
>WENV181513794
OGGU01030378
309417
Bacillota
GGC
Ala
>WENV181513331
OGGU01003186
158247
Bacillota
>WENV181512737
OGGU01000041
37213
Bacillota
TGA
Ser
>WENV181513367
OGGU01004028
144612
Bacillota
TCT
Arg
>WENV181513515
OGGU01007723
144612
Bacillota
TCT
Arg
>WENV181513660
OGGU01014873
144612
Bacillota
TCT
Arg
>WENV181513132
OGGU01001102
235134
Bacillota
GAA
Phe
>WENV181512716
OGGU01000025
339890
Bacillota
TTG
Gln
>WENV181513184
OGGU01001554
235098
Bacillota
GAC
Val
>WENV181513253
OGGU01002041
235098
Bacillota
GAC
Val
>WENV181513546
OGGU01009196
235098
Bacillota
GAC
Val
>WENV181513858
OGGU01045087
250201
Bacillota
TGC
Ala
>WENV181513303
OGGU01002818
44854
Bacillota
TGA
Ser
>WENV181512752
OGGU01000049
59312
Bacillota
CAG
Leu
>WENV181512708
OGGU01000020
338147
Bacillota
CTC
Glu
>WENV181512926
OGGU01000282
338147
Bacillota
CTC
Glu
>WENV181512906
OGGU01000248
155273
Bacillota
CAT
Met
>WENV181512680
OGGU01000006
235114
Bacillota
TTT
Lys
>WENV181513736
OGGU01022570
144668
Bacillota
GTC
Asp
>WENV181512660
OGGU01000001
429429
Bacillota
CCA
Trp
>WENV181512785
OGGU01000082
313454
Bacillota
GAA
Phe
>WENV181512750
OGGU01000049
44859
Bacillota
AAG
Leu
>WENV181512751
OGGU01000049
44859
Bacillota
AAG
Leu
>WENV181513496
OGGU01007078
11034
Bacillota
GGA
Ser
>WENV181513724
OGGU01020978
235079
Bacillota
GAA
Phe
>WENV181513312
OGGU01002961
338149
Bacillota
CTC
Glu
>WENV181513615
OGGU01011433
338149
Bacillota
CTC
Glu
>WENV181513617
OGGU01011442
245298
Bacillota
CGG
Pro
>WENV181512784
OGGU01000082
169968
Bacillota
CAT
Met
>WENV181513348
OGGU01003635
100326
Bacillota
GTA
Tyr
>WENV181512961
OGGU01000366
144610
Bacillota
GTG
His
>WENV181513133
OGGU01001102
240017
Bacillota
GCC
Gly
>WENV181513359
OGGU01003919
411547
Bacillota
CTG
Gln
>WENV181513692
OGGU01018022
411547
Bacillota
CTG
Gln
>WENV181513304
OGGU01002818
4624
Bacillota
GCT
Ser
>WENV181512894
OGGU01000218
263765
Bacillota
TAC
Val
>WENV181513393
OGGU01004423
235095
Bacillota
GGT
Thr
>WENV181513456
OGGU01005963
235095
Bacillota
GGT
Thr
>WENV181513859
OGGU01045206
235095
Bacillota
GGT
Thr
>WENV181513119
OGGU01000957
411549
Bacillota
TTG
Gln
>WENV181513379
OGGU01004143
411549
Bacillota
TTG
Gln
>WENV181512809
OGGU01000099
235142
Bacillota
CTT
Lys
>WENV181513356
OGGU01003851
148188
Bacillota
CCG
Arg
>WENV181513508
OGGU01007504
80612
Bacillota
GTA
Tyr
>WENV181513291
OGGU01002581
256380
Bacillota
>WENV181512664
OGGU01000002
298620
Bacillota
CAT
Met
>WENV181513267
OGGU01002242
235124
Bacillota
TGG
Pro
>WENV181513381
OGGU01004190
235124
Bacillota
TGG
Pro
>WENV181513513
OGGU01007712
235124
Bacillota
TGG
Pro
>WENV181513572
OGGU01010247
345314
Bacillota
TTG
Gln
>WENV181513277
OGGU01002440
338129
Bacillota
TGT
Thr
>WENV181512919
OGGU01000268
157838
Bacillota
GTC
Asp
>WENV181513556
OGGU01009472
144583
Bacillota
ACG
Arg
>WENV181513790
OGGU01030072
144652
Bacillota
GTC
Asp
>WENV181513629
OGGU01012037
247734
Bacillota
TGC
Ala
>WENV181513454
OGGU01005963
235171
Bacillota
CCA
Trp
>WENV181513245
OGGU01001892
238974
Bacillota
GAA
Phe
>WENV181513313
OGGU01002961
144621
Bacillota
GTT
Asn
>WENV181513616
OGGU01011433
144621
Bacillota
GTT
Asn
>WENV181512679
OGGU01000006
235113
Bacillota
GAA
Phe
>WENV181513392
OGGU01004399
58712
Bacillota
CAG
Leu
>WENV181513174
OGGU01001382
245296
Bacillota
CCC
Gly
>WENV181513414
OGGU01004947
144594
Bacillota
CAC
Val
>WENV181512770
OGGU01000060
95563
Bacillota
GTA
Tyr
>WENV181512845
OGGU01000140
338127
Bacillota
TTG
Gln
>WENV181513124
OGGU01001010
414486
Bacillota
CCC
Gly
>WENV181513452
OGGU01005893
272488
Bacillota
GAA
Phe
>WENV181513242
OGGU01001875
338128
Bacillota
TTC
Glu
>WENV181513501
OGGU01007243
338128
Bacillota
TTC
Glu
>WENV181513596
OGGU01010782
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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