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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181523374
OGHH01000029
235097
Bacteroidota
TTT
Lys
>WENV181523551
OGHH01000215
235097
Bacteroidota
TTT
Lys
>WENV181523700
OGHH01000557
235097
Bacteroidota
TTT
Lys
>WENV181523930
OGHH01001709
235097
Bacteroidota
TTT
Lys
>WENV181523963
OGHH01001888
235102
Bacteroidota
CGT
Thr
>WENV181524243
OGHH01008252
267954
Bacteroidota
GCC
Gly
>WENV181524254
OGHH01008731
144657
Bacteroidota
CGG
Pro
>WENV181523385
OGHH01000044
243025
Bacteroidota
CAT
Met
>WENV181524516
OGHH01060793
46165
Bacteroidota
TGA
Ser
>WENV181523696
OGHH01000536
17323
Bacteroidota
GGA
Ser
>WENV181524297
OGHH01010973
95618
Bacteroidota
TAG
Leu
>WENV181524203
OGHH01006449
338486
Bacteroidota
CAT
Met
>WENV181523594
OGHH01000287
415410
Bacteroidota
TTG
Gln
>WENV181523824
OGHH01001022
415410
Bacteroidota
TTG
Gln
>WENV181523833
OGHH01001050
415410
Bacteroidota
TTG
Gln
>WENV181524078
OGHH01003420
415410
Bacteroidota
TTG
Gln
>WENV181524284
OGHH01010184
59689
Bacteroidota
CAG
Leu
>WENV181524363
OGHH01019214
188343
Bacteroidota
TGC
Ala
>WENV181523644
OGHH01000397
344692
Bacteroidota
GGT
Thr
>WENV181524075
OGHH01003312
344692
Bacteroidota
GGT
Thr
>WENV181523596
OGHH01000292
341950
Bacteroidota
>WENV181523445
OGHH01000105
338124
Bacteroidota
CCG
Arg
>WENV181523567
OGHH01000236
338124
Bacteroidota
CCG
Arg
>WENV181524368
OGHH01019989
238121
Bacteroidota
CTT
Lys
>WENV181524047
OGHH01002759
126641
Bacteroidota
TAC
Val
>WENV181524231
OGHH01007600
126641
Bacteroidota
TAC
Val
>WENV181523394
OGHH01000052
338132
Bacteroidota
GCA
Cys
>WENV181523609
OGHH01000313
338132
Bacteroidota
GCA
Cys
>WENV181523689
OGHH01000513
338132
Bacteroidota
GCA
Cys
>WENV181523954
OGHH01001835
338132
Bacteroidota
GCA
Cys
>WENV181524149
OGHH01004768
45423
Bacteroidota
TGA
Ser
>WENV181524159
OGHH01004973
58714
Bacteroidota
CAA
Leu
>WENV181523578
OGHH01000251
280660
Bacteroidota
CCA
Trp
>WENV181524397
OGHH01024668
144933
Bacteroidota
TCT
Arg
>WENV181523380
OGHH01000039
144656
Bacteroidota
GTG
His
>WENV181523503
OGHH01000150
235207
Bacteroidota
CAT
Met
>WENV181524046
OGHH01002737
235207
Bacteroidota
CAT
Met
>WENV181524255
OGHH01008731
235180
Bacteroidota
CCA
Trp
>WENV181524202
OGHH01006402
144596
Bacteroidota
GGC
Ala
>WENV181523377
OGHH01000035
80607
Bacteroidota
GTA
Tyr
>WENV181523563
OGHH01000231
80607
Bacteroidota
GTA
Tyr
>WENV181524175
OGHH01005582
80607
Bacteroidota
GTA
Tyr
>WENV181524208
OGHH01006521
154643
Bacteroidota
CAT
Met
>WENV181523800
OGHH01000945
95559
Bacteroidota
TAG
Leu
>WENV181523370
OGHH01000026
419272
Bacteroidota
CTG
Gln
>WENV181523413
OGHH01000073
419272
Bacteroidota
CTG
Gln
>WENV181524187
OGHH01005895
144655
Bacteroidota
GGC
Ala
>WENV181524257
OGHH01008756
338164
Bacteroidota
TTC
Glu
>WENV181524465
OGHH01040037
95875
Bacteroidota
TAG
Leu
>WENV181524135
OGHH01004491
151121
Bacteroidota
CAT
Met
>WENV181523543
OGHH01000196
44852
Bacteroidota
TAA
Leu
>WENV181523577
OGHH01000250
44852
Bacteroidota
TAA
Leu
>WENV181524261
OGHH01008945
147439
Bacteroidota
TCT
Arg
>WENV181524066
OGHH01003178
280513
Bacteroidota
TTT
Lys
>WENV181524426
OGHH01032730
150485
Bacteroidota
GTT
Asn
>WENV181524427
OGHH01032730
150485
Bacteroidota
GTT
Asn
>WENV181524343
OGHH01016318
411550
Bacteroidota
CTG
Gln
>WENV181524344
OGHH01016318
411550
Bacteroidota
CTG
Gln
>WENV181523482
OGHH01000127
50727
Bacteroidota
TGA
Ser
>WENV181523536
OGHH01000193
50727
Bacteroidota
TGA
Ser
>WENV181523661
OGHH01000436
50727
Bacteroidota
TGA
Ser
>WENV181523832
OGHH01001045
50727
Bacteroidota
TGA
Ser
>WENV181524209
OGHH01006617
50727
Bacteroidota
TGA
Ser
>WENV181523369
OGHH01000026
132360
Bacteroidota
GGG
Pro
>WENV181523415
OGHH01000073
132360
Bacteroidota
GGG
Pro
>WENV181523597
OGHH01000292
132360
Bacteroidota
GGG
Pro
>WENV181524077
OGHH01003360
132360
Bacteroidota
GGG
Pro
>WENV181523588
OGHH01000273
425638
Bacteroidota
CTG
Gln
>WENV181523632
OGHH01000366
425638
Bacteroidota
CTG
Gln
>WENV181524310
OGHH01012602
425638
Bacteroidota
CTG
Gln
>WENV181523371
OGHH01000026
19317
Bacteroidota
GGA
Ser
>WENV181523802
OGHH01000948
353927
Bacteroidota
TTC
Glu
>WENV181523996
OGHH01002269
185921
Bacteroidota
GTC
Asp
>WENV181524429
OGHH01033218
146530
Bacteroidota
TGT
Thr
>WENV181524023
OGHH01002514
23696
Bacteroidota
GCT
Ser
>WENV181524398
OGHH01024867
23696
Bacteroidota
GCT
Ser
>WENV181523961
OGHH01001877
414426
Bacteroidota
CTG
Gln
>WENV181523381
OGHH01000039
16224
Bacteroidota
GGA
Ser
>WENV181523414
OGHH01000073
16220
Bacteroidota
GGA
Ser
>WENV181523572
OGHH01000245
338125
Bacteroidota
CCT
Arg
>WENV181524269
OGHH01009467
338125
Bacteroidota
CCT
Arg
>WENV181524389
OGHH01022557
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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