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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181529027
OGHL01014721
235153
Actinomycetota
CCT
Arg
>WENV181528182
OGHL01000002
144589
Actinomycetota
ACG
Arg
>WENV181528478
OGHL01000602
37070
Actinomycetota
CGA
Ser
>WENV181528343
OGHL01000163
235092
Actinomycetota
CCG
Arg
>WENV181528259
OGHL01000053
235174
Actinomycetota
TGC
Ala
>WENV181528899
OGHL01007912
235101
Actinomycetota
TTT
Lys
>WENV181529269
OGHL01054027
44855
Actinomycetota
TGA
Ser
>WENV181528659
OGHL01001678
44942
Actinomycetota
TGA
Ser
>WENV181528183
OGHL01000002
238473
Actinomycetota
GTG
His
>WENV181528310
OGHL01000109
338148
Actinomycetota
CTG
Gln
>WENV181528423
OGHL01000379
235148
Actinomycetota
GTT
Asn
>WENV181528294
OGHL01000089
145347
Actinomycetota
CAA
Leu
>WENV181529218
OGHL01040472
338139
Actinomycetota
GTT
Asn
>WENV181529231
OGHL01042754
237794
Actinomycetota
CCG
Arg
>WENV181528508
OGHL01000731
411554
Actinomycetota
CCC
Gly
>WENV181528301
OGHL01000103
113601
Actinomycetota
TAG
Leu
>WENV181528318
OGHL01000123
145343
Actinomycetota
GGG
Pro
>WENV181528270
OGHL01000069
235149
Actinomycetota
CCT
Arg
>WENV181529023
OGHL01014464
153915
Actinomycetota
ACG
Arg
>WENV181528367
OGHL01000207
145269
Actinomycetota
CAT
Met
>WENV181528300
OGHL01000103
235121
Actinomycetota
CGT
Thr
>WENV181528591
OGHL01001191
144635
Actinomycetota
TGG
Pro
>WENV181528293
OGHL01000089
119485
Actinomycetota
TAA
Leu
>WENV181528509
OGHL01000731
80622
Actinomycetota
CAG
Leu
>WENV181528388
OGHL01000251
147734
Actinomycetota
GTC
Asp
>WENV181528260
OGHL01000053
235173
Actinomycetota
GGC
Ala
>WENV181528275
OGHL01000079
235173
Actinomycetota
GGC
Ala
>WENV181528324
OGHL01000135
95593
Actinomycetota
>WENV181528181
OGHL01000002
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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