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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181528873
OGHL01006473
235102
Bacteroidota
CGT
Thr
>WENV181529074
OGHL01019468
144657
Bacteroidota
CGG
Pro
>WENV181528417
OGHL01000340
243025
Bacteroidota
CAT
Met
>WENV181528614
OGHL01001320
243025
Bacteroidota
CAT
Met
>WENV181528683
OGHL01002038
243025
Bacteroidota
CAT
Met
>WENV181528763
OGHL01003196
338155
Bacteroidota
CTC
Glu
>WENV181528958
OGHL01011257
153993
Bacteroidota
GAT
Ile
>WENV181528750
OGHL01002983
58715
Bacteroidota
GAG
Leu
>WENV181528536
OGHL01000871
46165
Bacteroidota
TGA
Ser
>WENV181528783
OGHL01003575
235817
Bacteroidota
GAA
Phe
>WENV181529006
OGHL01013015
338486
Bacteroidota
CAT
Met
>WENV181528688
OGHL01002100
411543
Bacteroidota
CTG
Gln
>WENV181528447
OGHL01000456
80835
Bacteroidota
GTA
Tyr
>WENV181528770
OGHL01003302
80835
Bacteroidota
GTA
Tyr
>WENV181528735
OGHL01002833
237247
Bacteroidota
TTT
Lys
>WENV181528679
OGHL01002012
344692
Bacteroidota
GGT
Thr
>WENV181528429
OGHL01000394
145504
Bacteroidota
TGT
Thr
>WENV181528691
OGHL01002135
341950
Bacteroidota
>WENV181528708
OGHL01002410
341950
Bacteroidota
>WENV181528372
OGHL01000225
338124
Bacteroidota
CCG
Arg
>WENV181528720
OGHL01002634
146800
Bacteroidota
>WENV181528611
OGHL01001309
235203
Bacteroidota
TTT
Lys
>WENV181528782
OGHL01003571
235203
Bacteroidota
TTT
Lys
>WENV181529017
OGHL01014317
238121
Bacteroidota
CTT
Lys
>WENV181528615
OGHL01001335
338132
Bacteroidota
GCA
Cys
>WENV181528626
OGHL01001418
338132
Bacteroidota
GCA
Cys
>WENV181528334
OGHL01000148
338132
Bacteroidota
GCA
Cys
>WENV181528320
OGHL01000131
58714
Bacteroidota
CAA
Leu
>WENV181528602
OGHL01001236
235165
Bacteroidota
CCA
Trp
>WENV181528651
OGHL01001623
144933
Bacteroidota
TCT
Arg
>WENV181528645
OGHL01001537
144656
Bacteroidota
GTG
His
>WENV181528742
OGHL01002900
144656
Bacteroidota
GTG
His
>WENV181529039
OGHL01015850
235207
Bacteroidota
CAT
Met
>WENV181528805
OGHL01004026
144659
Bacteroidota
GTG
His
>WENV181528808
OGHL01004354
235180
Bacteroidota
CCA
Trp
>WENV181528774
OGHL01003407
144596
Bacteroidota
GGC
Ala
>WENV181528868
OGHL01006224
80607
Bacteroidota
GTA
Tyr
>WENV181528755
OGHL01003107
16999
Bacteroidota
GGA
Ser
>WENV181528686
OGHL01002073
80614
Bacteroidota
>WENV181528547
OGHL01000962
154643
Bacteroidota
CAT
Met
>WENV181528864
OGHL01006159
154643
Bacteroidota
CAT
Met
>WENV181528387
OGHL01000250
144590
Bacteroidota
GTT
Asn
>WENV181528646
OGHL01001568
95559
Bacteroidota
TAG
Leu
>WENV181528714
OGHL01002554
144655
Bacteroidota
GGC
Ala
>WENV181528654
OGHL01001655
127277
Bacteroidota
TAC
Val
>WENV181528442
OGHL01000438
144639
Bacteroidota
GGC
Ala
>WENV181528696
OGHL01002258
95875
Bacteroidota
TAG
Leu
>WENV181528767
OGHL01003255
240012
Bacteroidota
CCC
Gly
>WENV181528829
OGHL01005141
44852
Bacteroidota
TAA
Leu
>WENV181528319
OGHL01000131
150485
Bacteroidota
GTT
Asn
>WENV181528661
OGHL01001687
342206
Bacteroidota
TTC
Glu
>WENV181528703
OGHL01002341
342206
Bacteroidota
TTC
Glu
>WENV181528914
OGHL01008923
146530
Bacteroidota
TGT
Thr
>WENV181528558
OGHL01001096
414426
Bacteroidota
CTG
Gln
>WENV181528436
OGHL01000409
16224
Bacteroidota
GGA
Ser
>WENV181528603
OGHL01001237
151960
Bacteroidota
GGC
Ala
>WENV181528295
OGHL01000094
16220
Bacteroidota
GGA
Ser
>WENV181528248
OGHL01000048
338125
Bacteroidota
CCT
Arg
>WENV181528754
OGHL01003078
235129
Bacteroidota
GCC
Gly
>WENV181528887
OGHL01007346
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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