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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181529539
OGHM01000541
95987
Bacteroidota
CAA
Leu
>WENV181529654
OGHM01001629
95987
Bacteroidota
CAA
Leu
>WENV181529374
OGHM01000047
141635
Bacteroidota
TAC
Val
>WENV181529380
OGHM01000060
141635
Bacteroidota
TAC
Val
>WENV181529549
OGHM01000635
339412
Bacteroidota
GGT
Thr
>WENV181529360
OGHM01000014
237796
Bacteroidota
CGT
Thr
>WENV181529379
OGHM01000055
413663
Bacteroidota
CTG
Gln
>WENV181529387
OGHM01000082
413663
Bacteroidota
CTG
Gln
>WENV181529742
OGHM01004373
237797
Bacteroidota
CCA
Trp
>WENV181529502
OGHM01000365
412479
Bacteroidota
TTG
Gln
>WENV181529405
OGHM01000116
147147
Bacteroidota
GTG
His
>WENV181529429
OGHM01000158
147147
Bacteroidota
GTG
His
>WENV181529462
OGHM01000202
147147
Bacteroidota
GTG
His
>WENV181529557
OGHM01000671
155123
Bacteroidota
GTT
Asn
>WENV181529558
OGHM01000671
155123
Bacteroidota
GTT
Asn
>WENV181529516
OGHM01000427
338132
Bacteroidota
GCA
Cys
>WENV181529536
OGHM01000523
193809
Bacteroidota
CAT
Met
>WENV181529371
OGHM01000040
37076
Bacteroidota
TAA
Leu
>WENV181529520
OGHM01000437
37076
Bacteroidota
TAA
Leu
>WENV181529701
OGHM01002741
37076
Bacteroidota
TAA
Leu
>WENV181529359
OGHM01000013
141414
Bacteroidota
GGG
Pro
>WENV181529475
OGHM01000255
53439
Bacteroidota
TGA
Ser
>WENV181529476
OGHM01000255
53439
Bacteroidota
TGA
Ser
>WENV181529403
OGHM01000113
235207
Bacteroidota
CAT
Met
>WENV181529461
OGHM01000202
344769
Bacteroidota
CTC
Glu
>WENV181529729
OGHM01004176
147148
Bacteroidota
CAT
Met
>WENV181529515
OGHM01000421
415558
Bacteroidota
TTG
Gln
>WENV181529809
OGHM01011604
175704
Bacteroidota
TGC
Ala
>WENV181529728
OGHM01004149
263771
Bacteroidota
CTT
Lys
>WENV181529454
OGHM01000192
44852
Bacteroidota
TAA
Leu
>WENV181529603
OGHM01001083
150485
Bacteroidota
GTT
Asn
>WENV181529645
OGHM01001482
150485
Bacteroidota
GTT
Asn
>WENV181529648
OGHM01001530
196394
Bacteroidota
GTC
Asp
>WENV181529649
OGHM01001530
196394
Bacteroidota
GTC
Asp
>WENV181529368
OGHM01000033
56823
Bacteroidota
TGA
Ser
>WENV181529510
OGHM01000394
56823
Bacteroidota
TGA
Ser
>WENV181529528
OGHM01000484
313363
Bacteroidota
GAA
Phe
>WENV181529620
OGHM01001205
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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