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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181534670
OGHU01000060
235097
Bacteroidota
TTT
Lys
>WENV181534880
OGHU01001236
235102
Bacteroidota
CGT
Thr
>WENV181535267
OGHU01012312
267954
Bacteroidota
GCC
Gly
>WENV181535370
OGHU01019741
144657
Bacteroidota
CGG
Pro
>WENV181535018
OGHU01003072
243025
Bacteroidota
CAT
Met
>WENV181534888
OGHU01001370
338155
Bacteroidota
CTC
Glu
>WENV181535565
OGHU01057764
153993
Bacteroidota
GAT
Ile
>WENV181535506
OGHU01040946
58715
Bacteroidota
GAG
Leu
>WENV181535554
OGHU01051494
46165
Bacteroidota
TGA
Ser
>WENV181535494
OGHU01039365
338486
Bacteroidota
CAT
Met
>WENV181535384
OGHU01021013
411543
Bacteroidota
CTG
Gln
>WENV181535505
OGHU01040946
59689
Bacteroidota
CAG
Leu
>WENV181535140
OGHU01006191
20893
Bacteroidota
GGA
Ser
>WENV181534719
OGHU01000240
344692
Bacteroidota
GGT
Thr
>WENV181534774
OGHU01000421
338124
Bacteroidota
CCG
Arg
>WENV181535036
OGHU01003384
338124
Bacteroidota
CCG
Arg
>WENV181534886
OGHU01001369
235203
Bacteroidota
TTT
Lys
>WENV181535131
OGHU01005997
126641
Bacteroidota
TAC
Val
>WENV181535039
OGHU01003405
338132
Bacteroidota
GCA
Cys
>WENV181534741
OGHU01000281
338132
Bacteroidota
GCA
Cys
>WENV181534861
OGHU01001031
338132
Bacteroidota
GCA
Cys
>WENV181534979
OGHU01002429
338132
Bacteroidota
GCA
Cys
>WENV181534895
OGHU01001474
58714
Bacteroidota
CAA
Leu
>WENV181534989
OGHU01002543
301449
Bacteroidota
CGG
Pro
>WENV181534883
OGHU01001281
144933
Bacteroidota
TCT
Arg
>WENV181535246
OGHU01010324
144656
Bacteroidota
GTG
His
>WENV181534668
OGHU01000058
235207
Bacteroidota
CAT
Met
>WENV181534831
OGHU01000811
235207
Bacteroidota
CAT
Met
>WENV181534846
OGHU01000884
235207
Bacteroidota
CAT
Met
>WENV181535339
OGHU01016257
144659
Bacteroidota
GTG
His
>WENV181535371
OGHU01019741
235180
Bacteroidota
CCA
Trp
>WENV181534981
OGHU01002437
144596
Bacteroidota
GGC
Ala
>WENV181534662
OGHU01000042
80607
Bacteroidota
GTA
Tyr
>WENV181534850
OGHU01000920
80607
Bacteroidota
GTA
Tyr
>WENV181534858
OGHU01001000
80607
Bacteroidota
GTA
Tyr
>WENV181535070
OGHU01004424
80614
Bacteroidota
>WENV181534635
OGHU01000005
52358
Bacteroidota
TGA
Ser
>WENV181534874
OGHU01001183
52358
Bacteroidota
TGA
Ser
>WENV181534891
OGHU01001402
52358
Bacteroidota
TGA
Ser
>WENV181534992
OGHU01002565
154643
Bacteroidota
CAT
Met
>WENV181534903
OGHU01001578
95559
Bacteroidota
TAG
Leu
>WENV181534964
OGHU01002078
95559
Bacteroidota
TAG
Leu
>WENV181534961
OGHU01002034
419272
Bacteroidota
CTG
Gln
>WENV181534776
OGHU01000428
144655
Bacteroidota
GGC
Ala
>WENV181535091
OGHU01004838
338164
Bacteroidota
TTC
Glu
>WENV181535149
OGHU01006688
95875
Bacteroidota
TAG
Leu
>WENV181534857
OGHU01000998
139743
Bacteroidota
GGG
Pro
>WENV181535046
OGHU01003713
139743
Bacteroidota
GGG
Pro
>WENV181534768
OGHU01000365
44852
Bacteroidota
TAA
Leu
>WENV181534805
OGHU01000569
44852
Bacteroidota
TAA
Leu
>WENV181535193
OGHU01007827
147439
Bacteroidota
TCT
Arg
>WENV181535017
OGHU01002916
411550
Bacteroidota
CTG
Gln
>WENV181534810
OGHU01000577
425638
Bacteroidota
CTG
Gln
>WENV181534970
OGHU01002240
425638
Bacteroidota
CTG
Gln
>WENV181535060
OGHU01004144
425638
Bacteroidota
CTG
Gln
>WENV181535022
OGHU01003099
239647
Bacteroidota
TTT
Lys
>WENV181534791
OGHU01000505
19317
Bacteroidota
GGA
Ser
>WENV181534884
OGHU01001309
353927
Bacteroidota
TTC
Glu
>WENV181534998
OGHU01002639
353927
Bacteroidota
TTC
Glu
>WENV181534887
OGHU01001370
23696
Bacteroidota
GCT
Ser
>WENV181535206
OGHU01008288
414426
Bacteroidota
CTG
Gln
>WENV181535537
OGHU01048516
151960
Bacteroidota
GGC
Ala
>WENV181534781
OGHU01000480
338125
Bacteroidota
CCT
Arg
>WENV181535426
OGHU01025692
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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