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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181544949
OGIG01004414
235097
Bacteroidota
TTT
Lys
>WENV181544606
OGIG01000687
95987
Bacteroidota
CAA
Leu
>WENV181544656
OGIG01000862
95987
Bacteroidota
CAA
Leu
>WENV181544940
OGIG01004128
339412
Bacteroidota
GGT
Thr
>WENV181544579
OGIG01000595
235102
Bacteroidota
CGT
Thr
>WENV181545120
OGIG01012095
267954
Bacteroidota
GCC
Gly
>WENV181545446
OGIG01052115
144657
Bacteroidota
CGG
Pro
>WENV181544507
OGIG01000450
243025
Bacteroidota
CAT
Met
>WENV181544558
OGIG01000555
243025
Bacteroidota
CAT
Met
>WENV181545470
OGIG01058113
243025
Bacteroidota
CAT
Met
>WENV181545472
OGIG01058688
58715
Bacteroidota
GAG
Leu
>WENV181545528
OGIG01078985
46165
Bacteroidota
TGA
Ser
>WENV181544504
OGIG01000444
17323
Bacteroidota
GGA
Ser
>WENV181544809
OGIG01002150
413663
Bacteroidota
CTG
Gln
>WENV181544219
OGIG01000010
415410
Bacteroidota
TTG
Gln
>WENV181545194
OGIG01016199
415410
Bacteroidota
TTG
Gln
>WENV181544810
OGIG01002156
144695
Bacteroidota
CAT
Met
>WENV181544560
OGIG01000558
412479
Bacteroidota
TTG
Gln
>WENV181544665
OGIG01000887
412479
Bacteroidota
TTG
Gln
>WENV181544417
OGIG01000231
147147
Bacteroidota
GTG
His
>WENV181544834
OGIG01002451
147147
Bacteroidota
GTG
His
>WENV181544228
OGIG01000015
344692
Bacteroidota
GGT
Thr
>WENV181544306
OGIG01000095
145504
Bacteroidota
TGT
Thr
>WENV181544275
OGIG01000065
341950
Bacteroidota
>WENV181544556
OGIG01000553
341950
Bacteroidota
>WENV181544319
OGIG01000106
338124
Bacteroidota
CCG
Arg
>WENV181544282
OGIG01000068
146800
Bacteroidota
>WENV181545040
OGIG01007501
126641
Bacteroidota
TAC
Val
>WENV181544270
OGIG01000058
338132
Bacteroidota
GCA
Cys
>WENV181544362
OGIG01000152
37076
Bacteroidota
TAA
Leu
>WENV181544827
OGIG01002417
37076
Bacteroidota
TAA
Leu
>WENV181545272
OGIG01024693
58714
Bacteroidota
CAA
Leu
>WENV181544609
OGIG01000696
235165
Bacteroidota
CCA
Trp
>WENV181544986
OGIG01005736
280660
Bacteroidota
CCA
Trp
>WENV181544958
OGIG01004796
144933
Bacteroidota
TCT
Arg
>WENV181544217
OGIG01000009
251266
Bacteroidota
CTT
Lys
>WENV181544420
OGIG01000242
235207
Bacteroidota
CAT
Met
>WENV181545119
OGIG01012081
235180
Bacteroidota
CCA
Trp
>WENV181544800
OGIG01002058
144596
Bacteroidota
GGC
Ala
>WENV181544213
OGIG01000007
80607
Bacteroidota
GTA
Tyr
>WENV181544352
OGIG01000143
113604
Bacteroidota
>WENV181544775
OGIG01001760
16999
Bacteroidota
GGA
Ser
>WENV181544329
OGIG01000114
154643
Bacteroidota
CAT
Met
>WENV181544419
OGIG01000239
144590
Bacteroidota
GTT
Asn
>WENV181544481
OGIG01000380
95559
Bacteroidota
TAG
Leu
>WENV181544393
OGIG01000198
419272
Bacteroidota
CTG
Gln
>WENV181544413
OGIG01000213
144655
Bacteroidota
GGC
Ala
>WENV181544524
OGIG01000485
144639
Bacteroidota
GGC
Ala
>WENV181545417
OGIG01044681
95875
Bacteroidota
TAG
Leu
>WENV181545386
OGIG01039290
147439
Bacteroidota
TCT
Arg
>WENV181545148
OGIG01013549
280513
Bacteroidota
TTT
Lys
>WENV181544249
OGIG01000039
150485
Bacteroidota
GTT
Asn
>WENV181544461
OGIG01000331
50727
Bacteroidota
TGA
Ser
>WENV181544467
OGIG01000347
50727
Bacteroidota
TGA
Ser
>WENV181545002
OGIG01006212
50727
Bacteroidota
TGA
Ser
>WENV181544395
OGIG01000198
132360
Bacteroidota
GGG
Pro
>WENV181544557
OGIG01000553
132360
Bacteroidota
GGG
Pro
>WENV181544578
OGIG01000591
132360
Bacteroidota
GGG
Pro
>WENV181545265
OGIG01023536
132360
Bacteroidota
GGG
Pro
>WENV181544486
OGIG01000406
425638
Bacteroidota
CTG
Gln
>WENV181544712
OGIG01001179
425638
Bacteroidota
CTG
Gln
>WENV181544386
OGIG01000188
239647
Bacteroidota
TTT
Lys
>WENV181545024
OGIG01006799
353927
Bacteroidota
TTC
Glu
>WENV181545202
OGIG01017238
146530
Bacteroidota
TGT
Thr
>WENV181544655
OGIG01000859
412236
Bacteroidota
CCC
Gly
>WENV181544216
OGIG01000008
414426
Bacteroidota
CTG
Gln
>WENV181544314
OGIG01000101
414426
Bacteroidota
CTG
Gln
>WENV181544502
OGIG01000433
16224
Bacteroidota
GGA
Ser
>WENV181545343
OGIG01033934
151960
Bacteroidota
GGC
Ala
>WENV181545503
OGIG01072108
151960
Bacteroidota
GGC
Ala
>WENV181544469
OGIG01000353
338125
Bacteroidota
CCT
Arg
>WENV181544817
OGIG01002265
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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