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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181550709
OGIN01000043
235097
Bacteroidota
TTT
Lys
>WENV181550768
OGIN01000079
235097
Bacteroidota
TTT
Lys
>WENV181550667
OGIN01000025
235102
Bacteroidota
CGT
Thr
>WENV181550860
OGIN01000185
343138
Bacteroidota
CCT
Arg
>WENV181550889
OGIN01000218
95618
Bacteroidota
TAG
Leu
>WENV181551182
OGIN01001389
415410
Bacteroidota
TTG
Gln
>WENV181551231
OGIN01001687
415410
Bacteroidota
TTG
Gln
>WENV181551417
OGIN01010063
415410
Bacteroidota
TTG
Gln
>WENV181550608
OGIN01000001
411543
Bacteroidota
CTG
Gln
>WENV181550773
OGIN01000086
235182
Bacteroidota
>WENV181551112
OGIN01000799
272983
Bacteroidota
CGT
Thr
>WENV181551004
OGIN01000391
338124
Bacteroidota
CCG
Arg
>WENV181551291
OGIN01003068
126641
Bacteroidota
TAC
Val
>WENV181551292
OGIN01003068
126641
Bacteroidota
TAC
Val
>WENV181550707
OGIN01000042
338132
Bacteroidota
GCA
Cys
>WENV181550796
OGIN01000123
338132
Bacteroidota
GCA
Cys
>WENV181551127
OGIN01000990
338132
Bacteroidota
GCA
Cys
>WENV181550719
OGIN01000051
144688
Bacteroidota
CAT
Met
>WENV181550842
OGIN01000164
193809
Bacteroidota
CAT
Met
>WENV181550718
OGIN01000050
181746
Bacteroidota
GGC
Ala
>WENV181550714
OGIN01000044
301449
Bacteroidota
CGG
Pro
>WENV181550902
OGIN01000234
301449
Bacteroidota
CGG
Pro
>WENV181551242
OGIN01001926
301449
Bacteroidota
CGG
Pro
>WENV181550618
OGIN01000007
144933
Bacteroidota
TCT
Arg
>WENV181551166
OGIN01001245
144933
Bacteroidota
TCT
Arg
>WENV181551349
OGIN01004777
144933
Bacteroidota
TCT
Arg
>WENV181550791
OGIN01000117
144656
Bacteroidota
GTG
His
>WENV181550834
OGIN01000159
235207
Bacteroidota
CAT
Met
>WENV181551099
OGIN01000745
235207
Bacteroidota
CAT
Met
>WENV181551097
OGIN01000718
144596
Bacteroidota
GGC
Ala
>WENV181550710
OGIN01000043
80607
Bacteroidota
GTA
Tyr
>WENV181550871
OGIN01000200
80607
Bacteroidota
GTA
Tyr
>WENV181550927
OGIN01000276
80607
Bacteroidota
GTA
Tyr
>WENV181550787
OGIN01000111
52358
Bacteroidota
TGA
Ser
>WENV181550789
OGIN01000113
52358
Bacteroidota
TGA
Ser
>WENV181550833
OGIN01000153
52358
Bacteroidota
TGA
Ser
>WENV181551065
OGIN01000556
52358
Bacteroidota
TGA
Ser
>WENV181551181
OGIN01001377
52358
Bacteroidota
TGA
Ser
>WENV181551356
OGIN01004897
52358
Bacteroidota
TGA
Ser
>WENV181550876
OGIN01000206
95559
Bacteroidota
TAG
Leu
>WENV181550857
OGIN01000180
419272
Bacteroidota
CTG
Gln
>WENV181550691
OGIN01000037
144655
Bacteroidota
GGC
Ala
>WENV181550720
OGIN01000051
338314
Bacteroidota
CCT
Arg
>WENV181550805
OGIN01000132
44852
Bacteroidota
TAA
Leu
>WENV181550607
OGIN01000001
132360
Bacteroidota
GGG
Pro
>WENV181551128
OGIN01001009
132360
Bacteroidota
GGG
Pro
>WENV181550653
OGIN01000020
425638
Bacteroidota
CTG
Gln
>WENV181551038
OGIN01000468
425638
Bacteroidota
CTG
Gln
>WENV181550986
OGIN01000367
239647
Bacteroidota
TTT
Lys
>WENV181551155
OGIN01001149
239647
Bacteroidota
TTT
Lys
>WENV181550788
OGIN01000112
19317
Bacteroidota
GGA
Ser
>WENV181551084
OGIN01000670
185921
Bacteroidota
GTC
Asp
>WENV181550858
OGIN01000180
16220
Bacteroidota
GGA
Ser
>WENV181550803
OGIN01000132
338125
Bacteroidota
CCT
Arg
>WENV181551069
OGIN01000567
411629
Bacteroidota
TTG
Gln
>WENV181551150
OGIN01001108
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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