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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181563483
OGJH01000002
235097
Bacteroidota
TTT
Lys
>WENV181563515
OGJH01000014
235097
Bacteroidota
TTT
Lys
>WENV181563630
OGJH01000096
235097
Bacteroidota
TTT
Lys
>WENV181564002
OGJH01000988
235102
Bacteroidota
CGT
Thr
>WENV181564299
OGJH01003327
144657
Bacteroidota
CGG
Pro
>WENV181563581
OGJH01000053
338155
Bacteroidota
CTC
Glu
>WENV181564761
OGJH01025783
339341
Bacteroidota
GGT
Thr
>WENV181563833
OGJH01000463
58715
Bacteroidota
GAG
Leu
>WENV181563534
OGJH01000022
95618
Bacteroidota
TAG
Leu
>WENV181563520
OGJH01000017
338486
Bacteroidota
CAT
Met
>WENV181563521
OGJH01000017
338486
Bacteroidota
CAT
Met
>WENV181563537
OGJH01000024
411543
Bacteroidota
CTG
Gln
>WENV181563539
OGJH01000027
436206
Bacteroidota
TTG
Gln
>WENV181563872
OGJH01000591
436206
Bacteroidota
TTG
Gln
>WENV181563700
OGJH01000198
20893
Bacteroidota
GGA
Ser
>WENV181563690
OGJH01000177
235182
Bacteroidota
>WENV181563650
OGJH01000118
338124
Bacteroidota
CCG
Arg
>WENV181563748
OGJH01000288
238121
Bacteroidota
CTT
Lys
>WENV181564092
OGJH01001529
126641
Bacteroidota
TAC
Val
>WENV181563536
OGJH01000024
338132
Bacteroidota
GCA
Cys
>WENV181563584
OGJH01000057
338132
Bacteroidota
GCA
Cys
>WENV181564025
OGJH01001106
338132
Bacteroidota
GCA
Cys
>WENV181564169
OGJH01002066
338132
Bacteroidota
GCA
Cys
>WENV181563653
OGJH01000125
144688
Bacteroidota
CAT
Met
>WENV181563543
OGJH01000030
181746
Bacteroidota
GGC
Ala
>WENV181564131
OGJH01001732
301449
Bacteroidota
CGG
Pro
>WENV181564814
OGJH01036036
301449
Bacteroidota
CGG
Pro
>WENV181563562
OGJH01000045
144933
Bacteroidota
TCT
Arg
>WENV181563876
OGJH01000607
144933
Bacteroidota
TCT
Arg
>WENV181563661
OGJH01000138
144656
Bacteroidota
GTG
His
>WENV181563724
OGJH01000246
235207
Bacteroidota
CAT
Met
>WENV181563841
OGJH01000479
235207
Bacteroidota
CAT
Met
>WENV181563845
OGJH01000507
235207
Bacteroidota
CAT
Met
>WENV181563807
OGJH01000397
80607
Bacteroidota
GTA
Tyr
>WENV181563882
OGJH01000614
80614
Bacteroidota
>WENV181563776
OGJH01000344
95559
Bacteroidota
TAG
Leu
>WENV181563614
OGJH01000076
419272
Bacteroidota
CTG
Gln
>WENV181563672
OGJH01000150
144655
Bacteroidota
GGC
Ala
>WENV181563596
OGJH01000066
95875
Bacteroidota
TAG
Leu
>WENV181563646
OGJH01000110
139743
Bacteroidota
GGG
Pro
>WENV181563709
OGJH01000215
139743
Bacteroidota
GGG
Pro
>WENV181564018
OGJH01001088
240012
Bacteroidota
CCC
Gly
>WENV181563560
OGJH01000042
44852
Bacteroidota
TAA
Leu
>WENV181563645
OGJH01000110
425638
Bacteroidota
CTG
Gln
>WENV181563818
OGJH01000411
425638
Bacteroidota
CTG
Gln
>WENV181564095
OGJH01001553
425638
Bacteroidota
CTG
Gln
>WENV181563658
OGJH01000134
239647
Bacteroidota
TTT
Lys
>WENV181563533
OGJH01000021
19317
Bacteroidota
GGA
Ser
>WENV181563883
OGJH01000614
185921
Bacteroidota
GTC
Asp
>WENV181563902
OGJH01000668
55270
Bacteroidota
TGA
Ser
>WENV181563959
OGJH01000854
55270
Bacteroidota
TGA
Ser
>WENV181564080
OGJH01001430
55270
Bacteroidota
TGA
Ser
>WENV181563489
OGJH01000002
16224
Bacteroidota
GGA
Ser
>WENV181563662
OGJH01000138
16224
Bacteroidota
GGA
Ser
>WENV181563615
OGJH01000076
16220
Bacteroidota
GGA
Ser
>WENV181563558
OGJH01000042
338125
Bacteroidota
CCT
Arg
>WENV181563707
OGJH01000212
235129
Bacteroidota
GCC
Gly
>WENV181563719
OGJH01000233
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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