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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181567288
OGJJ01003102
235097
Bacteroidota
TTT
Lys
>WENV181567512
OGJJ01008273
95987
Bacteroidota
CAA
Leu
>WENV181566884
OGJJ01000415
339412
Bacteroidota
GGT
Thr
>WENV181566910
OGJJ01000477
235102
Bacteroidota
CGT
Thr
>WENV181567176
OGJJ01001997
235102
Bacteroidota
CGT
Thr
>WENV181566598
OGJJ01000011
237796
Bacteroidota
CGT
Thr
>WENV181567649
OGJJ01020290
48053
Bacteroidota
TGA
Ser
>WENV181566758
OGJJ01000142
413663
Bacteroidota
CTG
Gln
>WENV181566759
OGJJ01000142
413663
Bacteroidota
CTG
Gln
>WENV181566976
OGJJ01000676
415410
Bacteroidota
TTG
Gln
>WENV181566885
OGJJ01000415
237797
Bacteroidota
CCA
Trp
>WENV181566940
OGJJ01000538
412479
Bacteroidota
TTG
Gln
>WENV181566961
OGJJ01000624
147147
Bacteroidota
GTG
His
>WENV181566962
OGJJ01000624
147147
Bacteroidota
GTG
His
>WENV181567757
OGJJ01055540
341950
Bacteroidota
>WENV181567197
OGJJ01002216
338124
Bacteroidota
CCG
Arg
>WENV181567500
OGJJ01007796
338132
Bacteroidota
GCA
Cys
>WENV181567008
OGJJ01000763
238810
Bacteroidota
CGG
Pro
>WENV181566873
OGJJ01000380
46489
Bacteroidota
TGA
Ser
>WENV181566874
OGJJ01000380
46489
Bacteroidota
TGA
Ser
>WENV181566766
OGJJ01000153
37076
Bacteroidota
TAA
Leu
>WENV181567111
OGJJ01001484
37076
Bacteroidota
TAA
Leu
>WENV181567064
OGJJ01001039
144656
Bacteroidota
GTG
His
>WENV181566988
OGJJ01000720
235207
Bacteroidota
CAT
Met
>WENV181566965
OGJJ01000639
80607
Bacteroidota
GTA
Tyr
>WENV181567315
OGJJ01003398
344769
Bacteroidota
CTC
Glu
>WENV181566947
OGJJ01000559
415558
Bacteroidota
TTG
Gln
>WENV181566997
OGJJ01000731
144590
Bacteroidota
GTT
Asn
>WENV181566823
OGJJ01000283
95559
Bacteroidota
TAG
Leu
>WENV181567209
OGJJ01002359
144655
Bacteroidota
GGC
Ala
>WENV181567660
OGJJ01021894
151121
Bacteroidota
CAT
Met
>WENV181567729
OGJJ01045012
411550
Bacteroidota
CTG
Gln
>WENV181567357
OGJJ01004225
146764
Bacteroidota
GTC
Asp
>WENV181567358
OGJJ01004225
146764
Bacteroidota
GTC
Asp
>WENV181567025
OGJJ01000877
16220
Bacteroidota
GGA
Ser
>WENV181566834
OGJJ01000305
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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