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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181572739
OGJR01000045
235146
Actinomycetota
CGT
Thr
>WENV181572654
OGJR01000001
235347
Actinomycetota
GGC
Ala
>WENV181572655
OGJR01000001
235347
Actinomycetota
GGC
Ala
>WENV181572688
OGJR01000008
166493
Actinomycetota
CTT
Lys
>WENV181572656
OGJR01000001
144600
Actinomycetota
TGG
Pro
>WENV181572657
OGJR01000001
235194
Actinomycetota
GTG
His
>WENV181572737
OGJR01000045
273786
Actinomycetota
CGT
Thr
>WENV181572650
OGJR01000001
158720
Actinomycetota
ACG
Arg
>WENV181572651
OGJR01000001
158720
Actinomycetota
ACG
Arg
>WENV181572667
OGJR01000005
411601
Actinomycetota
CCC
Gly
>WENV181572885
OGJR01000337
144826
Actinomycetota
GGG
Pro
>WENV181572731
OGJR01000041
23370
Actinomycetota
GCT
Ser
>WENV181572664
OGJR01000005
174149
Actinomycetota
GAT
Ile
>WENV181572690
OGJR01000010
338239
Actinomycetota
TTC
Glu
>WENV181572665
OGJR01000005
235174
Actinomycetota
TGC
Ala
>WENV181572687
OGJR01000008
235101
Actinomycetota
TTT
Lys
>WENV181572648
OGJR01000001
121510
Actinomycetota
TAA
Leu
>WENV181572692
OGJR01000010
44855
Actinomycetota
TGA
Ser
>WENV181572732
OGJR01000041
44862
Actinomycetota
CGA
Ser
>WENV181572653
OGJR01000001
413665
Actinomycetota
TTG
Gln
>WENV181573113
OGJR01001311
254857
Actinomycetota
CCG
Arg
>WENV181572730
OGJR01000041
144700
Actinomycetota
CAT
Met
>WENV181573634
OGJR01030318
144636
Actinomycetota
GAT
Ile
>WENV181572685
OGJR01000008
243671
Actinomycetota
CTC
Glu
>WENV181572686
OGJR01000008
338148
Actinomycetota
CTG
Gln
>WENV181572823
OGJR01000182
235148
Actinomycetota
GTT
Asn
>WENV181572824
OGJR01000182
235148
Actinomycetota
GTT
Asn
>WENV181572695
OGJR01000010
144825
Actinomycetota
CAT
Met
>WENV181573630
OGJR01029813
338139
Actinomycetota
GTT
Asn
>WENV181572696
OGJR01000010
235348
Actinomycetota
CCT
Arg
>WENV181572738
OGJR01000045
113601
Actinomycetota
TAG
Leu
>WENV181572649
OGJR01000001
144595
Actinomycetota
CAA
Leu
>WENV181573550
OGJR01019552
414234
Actinomycetota
CTG
Gln
>WENV181572689
OGJR01000008
47164
Actinomycetota
GGA
Ser
>WENV181572652
OGJR01000001
17009
Actinomycetota
GAG
Leu
>WENV181572663
OGJR01000005
80622
Actinomycetota
CAG
Leu
>WENV181572960
OGJR01000586
243162
Actinomycetota
GTT
Asn
>WENV181572726
OGJR01000035
144660
Actinomycetota
TAC
Val
>WENV181572729
OGJR01000041
95593
Actinomycetota
>WENV181572747
OGJR01000054
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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