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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181583269
OGKD01000861
95987
Bacteroidota
CAA
Leu
>WENV181583071
OGKD01000147
339412
Bacteroidota
GGT
Thr
>WENV181582953
OGKD01000032
235102
Bacteroidota
CGT
Thr
>WENV181583236
OGKD01000669
144657
Bacteroidota
CGG
Pro
>WENV181583354
OGKD01001530
243025
Bacteroidota
CAT
Met
>WENV181583505
OGKD01003911
97336
Bacteroidota
CAG
Leu
>WENV181583116
OGKD01000225
343138
Bacteroidota
CCT
Arg
>WENV181583603
OGKD01007218
46165
Bacteroidota
TGA
Ser
>WENV181583803
OGKD01026227
95618
Bacteroidota
TAG
Leu
>WENV181583642
OGKD01008805
338486
Bacteroidota
CAT
Met
>WENV181583569
OGKD01005719
48053
Bacteroidota
TGA
Ser
>WENV181583217
OGKD01000543
413663
Bacteroidota
CTG
Gln
>WENV181583218
OGKD01000543
413663
Bacteroidota
CTG
Gln
>WENV181583476
OGKD01003027
136244
Bacteroidota
TAC
Val
>WENV181583665
OGKD01010308
411543
Bacteroidota
CTG
Gln
>WENV181583072
OGKD01000147
237797
Bacteroidota
CCA
Trp
>WENV181583430
OGKD01002327
59689
Bacteroidota
CAG
Leu
>WENV181583231
OGKD01000628
436206
Bacteroidota
TTG
Gln
>WENV181583403
OGKD01001980
436206
Bacteroidota
TTG
Gln
>WENV181583484
OGKD01003427
20893
Bacteroidota
GGA
Ser
>WENV181583164
OGKD01000340
412479
Bacteroidota
TTG
Gln
>WENV181583073
OGKD01000149
338124
Bacteroidota
CCG
Arg
>WENV181583723
OGKD01015178
238121
Bacteroidota
CTT
Lys
>WENV181583220
OGKD01000551
338132
Bacteroidota
GCA
Cys
>WENV181583724
OGKD01015178
45423
Bacteroidota
TGA
Ser
>WENV181583100
OGKD01000194
37076
Bacteroidota
TAA
Leu
>WENV181582895
OGKD01000004
301449
Bacteroidota
CGG
Pro
>WENV181583127
OGKD01000254
144933
Bacteroidota
TCT
Arg
>WENV181583039
OGKD01000105
144656
Bacteroidota
GTG
His
>WENV181582968
OGKD01000045
235207
Bacteroidota
CAT
Met
>WENV181583502
OGKD01003882
235207
Bacteroidota
CAT
Met
>WENV181583314
OGKD01001250
144659
Bacteroidota
GTG
His
>WENV181583237
OGKD01000669
235180
Bacteroidota
CCA
Trp
>WENV181583063
OGKD01000138
144596
Bacteroidota
GGC
Ala
>WENV181583327
OGKD01001350
80607
Bacteroidota
GTA
Tyr
>WENV181583170
OGKD01000379
344769
Bacteroidota
CTC
Glu
>WENV181583425
OGKD01002237
344769
Bacteroidota
CTC
Glu
>WENV181583293
OGKD01001108
80614
Bacteroidota
>WENV181583018
OGKD01000078
52358
Bacteroidota
TGA
Ser
>WENV181583132
OGKD01000288
52358
Bacteroidota
TGA
Ser
>WENV181583161
OGKD01000335
144590
Bacteroidota
GTT
Asn
>WENV181582973
OGKD01000051
419272
Bacteroidota
CTG
Gln
>WENV181583117
OGKD01000231
144655
Bacteroidota
GGC
Ala
>WENV181583115
OGKD01000225
338164
Bacteroidota
TTC
Glu
>WENV181583614
OGKD01007556
338314
Bacteroidota
CCT
Arg
>WENV181582974
OGKD01000051
139743
Bacteroidota
GGG
Pro
>WENV181583550
OGKD01004999
240012
Bacteroidota
CCC
Gly
>WENV181583874
OGKD01044784
150485
Bacteroidota
GTT
Asn
>WENV181583480
OGKD01003215
411550
Bacteroidota
CTG
Gln
>WENV181583213
OGKD01000525
196394
Bacteroidota
GTC
Asp
>WENV181583471
OGKD01002956
196394
Bacteroidota
GTC
Asp
>WENV181583015
OGKD01000073
425638
Bacteroidota
CTG
Gln
>WENV181583092
OGKD01000172
425638
Bacteroidota
CTG
Gln
>WENV181583448
OGKD01002488
425638
Bacteroidota
CTG
Gln
>WENV181583337
OGKD01001419
19317
Bacteroidota
GGA
Ser
>WENV181583177
OGKD01000407
185921
Bacteroidota
GTC
Asp
>WENV181583566
OGKD01005676
23696
Bacteroidota
GCT
Ser
>WENV181583233
OGKD01000651
16224
Bacteroidota
GGA
Ser
>WENV181583559
OGKD01005330
151960
Bacteroidota
GGC
Ala
>WENV181583052
OGKD01000123
16220
Bacteroidota
GGA
Ser
>WENV181582961
OGKD01000036
338125
Bacteroidota
CCT
Arg
>WENV181583440
OGKD01002437
338125
Bacteroidota
CCT
Arg
>WENV181583423
OGKD01002236
235129
Bacteroidota
GCC
Gly
>WENV181583714
OGKD01014462
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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