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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181596123
OGKX01001059
37213
Bacillota
TGA
Ser
>WENV181596109
OGKX01000934
144612
Bacillota
TCT
Arg
>WENV181596129
OGKX01001171
144612
Bacillota
TCT
Arg
>WENV181595939
OGKX01000120
267649
Bacillota
TAC
Val
>WENV181596217
OGKX01003044
235098
Bacillota
GAC
Val
>WENV181596036
OGKX01000497
44854
Bacillota
TGA
Ser
>WENV181596065
OGKX01000593
44854
Bacillota
TGA
Ser
>WENV181596070
OGKX01000612
44854
Bacillota
TGA
Ser
>WENV181596526
OGKX01036116
235154
Bacillota
GTT
Asn
>WENV181596405
OGKX01012622
246023
Bacillota
TGC
Ala
>WENV181596052
OGKX01000524
59312
Bacillota
CAG
Leu
>WENV181596118
OGKX01001017
340802
Bacillota
TTG
Gln
>WENV181596191
OGKX01002230
182792
Bacillota
GTC
Asp
>WENV181596059
OGKX01000566
11034
Bacillota
GGA
Ser
>WENV181596390
OGKX01011758
274189
Bacillota
TGT
Thr
>WENV181596366
OGKX01010060
338149
Bacillota
CTC
Glu
>WENV181596080
OGKX01000687
185817
Bacillota
CAT
Met
>WENV181596283
OGKX01005046
245298
Bacillota
CGG
Pro
>WENV181596353
OGKX01009356
245298
Bacillota
CGG
Pro
>WENV181596427
OGKX01015055
245298
Bacillota
CGG
Pro
>WENV181596515
OGKX01033693
37269
Bacillota
TGA
Ser
>WENV181596238
OGKX01003712
413152
Bacillota
TCC
Gly
>WENV181596315
OGKX01006153
153911
Bacillota
GAT
Ile
>WENV181596184
OGKX01002157
411547
Bacillota
CTG
Gln
>WENV181596204
OGKX01002726
411547
Bacillota
CTG
Gln
>WENV181596251
OGKX01004061
411547
Bacillota
CTG
Gln
>WENV181596282
OGKX01005046
411547
Bacillota
CTG
Gln
>WENV181596426
OGKX01015055
411547
Bacillota
CTG
Gln
>WENV181596352
OGKX01009356
411547
Bacillota
CTG
Gln
>WENV181596294
OGKX01005685
147684
Bacillota
ACG
Arg
>WENV181596037
OGKX01000497
4624
Bacillota
GCT
Ser
>WENV181596066
OGKX01000593
4624
Bacillota
GCT
Ser
>WENV181596071
OGKX01000612
4624
Bacillota
GCT
Ser
>WENV181596107
OGKX01000909
235095
Bacillota
GGT
Thr
>WENV181596192
OGKX01002230
235095
Bacillota
GGT
Thr
>WENV181596193
OGKX01002230
235095
Bacillota
GGT
Thr
>WENV181596350
OGKX01008897
235095
Bacillota
GGT
Thr
>WENV181596486
OGKX01026309
185292
Bacillota
ACG
Arg
>WENV181595934
OGKX01000111
419639
Bacillota
GCA
Cys
>WENV181596106
OGKX01000907
411549
Bacillota
TTG
Gln
>WENV181596104
OGKX01000876
148188
Bacillota
CCG
Arg
>WENV181596159
OGKX01001608
80612
Bacillota
GTA
Tyr
>WENV181596225
OGKX01003367
80612
Bacillota
GTA
Tyr
>WENV181596305
OGKX01005925
241432
Bacillota
TGT
Thr
>WENV181596149
OGKX01001451
235124
Bacillota
TGG
Pro
>WENV181596224
OGKX01003358
235124
Bacillota
TGG
Pro
>WENV181596189
OGKX01002216
338129
Bacillota
TGT
Thr
>WENV181596397
OGKX01011971
144583
Bacillota
ACG
Arg
>WENV181596190
OGKX01002230
235171
Bacillota
CCA
Trp
>WENV181596144
OGKX01001326
144621
Bacillota
GTT
Asn
>WENV181595857
OGKX01000011
277200
Bacillota
GGC
Ala
>WENV181595981
OGKX01000239
58712
Bacillota
CAG
Leu
>WENV181596054
OGKX01000550
58712
Bacillota
CAG
Leu
>WENV181596084
OGKX01000709
58712
Bacillota
CAG
Leu
>WENV181596091
OGKX01000764
58712
Bacillota
CAG
Leu
>WENV181596169
OGKX01001820
58712
Bacillota
CAG
Leu
>WENV181596101
OGKX01000839
245296
Bacillota
CCC
Gly
>WENV181596201
OGKX01002654
245296
Bacillota
CCC
Gly
>WENV181596234
OGKX01003624
245296
Bacillota
CCC
Gly
>WENV181596367
OGKX01010060
272992
Bacillota
CTT
Lys
>WENV181595837
OGKX01000002
344240
Bacillota
GCC
Gly
>WENV181596518
OGKX01034031
144594
Bacillota
CAC
Val
>WENV181596102
OGKX01000844
272488
Bacillota
GAA
Phe
>WENV181596295
OGKX01005710
272488
Bacillota
GAA
Phe
>WENV181595960
OGKX01000168
238945
Bacillota
GCC
Gly
>WENV181596288
OGKX01005231
238945
Bacillota
GCC
Gly
>WENV181596076
OGKX01000632
338128
Bacillota
TTC
Glu
>WENV181596034
OGKX01000470
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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