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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181596711
OGKY01000327
24650
Bacillota
TAA
Leu
>WENV181596858
OGKY01003019
309417
Bacillota
GGC
Ala
>WENV181596712
OGKY01000331
144612
Bacillota
TCT
Arg
>WENV181596643
OGKY01000105
235134
Bacillota
GAA
Phe
>WENV181596838
OGKY01001854
235098
Bacillota
GAC
Val
>WENV181596765
OGKY01000777
338152
Bacillota
TTC
Glu
>WENV181596799
OGKY01001143
148239
Bacillota
TCT
Arg
>WENV181596749
OGKY01000590
44854
Bacillota
TGA
Ser
>WENV181596865
OGKY01003360
144577
Bacillota
GAT
Ile
>WENV181596893
OGKY01005930
304022
Bacillota
GCC
Gly
>WENV181596919
OGKY01011304
429443
Bacillota
GCA
Cys
>WENV181596892
OGKY01005860
235150
Bacillota
TGC
Ala
>WENV181596902
OGKY01007524
341763
Bacillota
CTC
Glu
>WENV181596673
OGKY01000206
429429
Bacillota
CCA
Trp
>WENV181596896
OGKY01006349
41154
Bacillota
TAA
Leu
>WENV181596873
OGKY01004163
11034
Bacillota
GGA
Ser
>WENV181596800
OGKY01001143
156937
Bacillota
GTG
His
>WENV181596806
OGKY01001192
338149
Bacillota
CTC
Glu
>WENV181596790
OGKY01000979
245298
Bacillota
CGG
Pro
>WENV181596818
OGKY01001391
37269
Bacillota
TGA
Ser
>WENV181596644
OGKY01000105
240017
Bacillota
GCC
Gly
>WENV181596789
OGKY01000979
411547
Bacillota
CTG
Gln
>WENV181596852
OGKY01002488
411547
Bacillota
CTG
Gln
>WENV181596750
OGKY01000590
4624
Bacillota
GCT
Ser
>WENV181596886
OGKY01005135
235095
Bacillota
GGT
Thr
>WENV181596767
OGKY01000800
419639
Bacillota
GCA
Cys
>WENV181596853
OGKY01002595
411549
Bacillota
TTG
Gln
>WENV181596822
OGKY01001444
148188
Bacillota
CCG
Arg
>WENV181596684
OGKY01000219
80612
Bacillota
GTA
Tyr
>WENV181596704
OGKY01000302
256380
Bacillota
>WENV181596779
OGKY01000938
235124
Bacillota
TGG
Pro
>WENV181596755
OGKY01000621
144583
Bacillota
ACG
Arg
>WENV181596871
OGKY01003881
238974
Bacillota
GAA
Phe
>WENV181596807
OGKY01001192
144621
Bacillota
GTT
Asn
>WENV181596816
OGKY01001377
277200
Bacillota
GGC
Ala
>WENV181596714
OGKY01000331
58712
Bacillota
CAG
Leu
>WENV181596753
OGKY01000619
58712
Bacillota
CAG
Leu
>WENV181596823
OGKY01001474
245296
Bacillota
CCC
Gly
>WENV181596756
OGKY01000637
344240
Bacillota
GCC
Gly
>WENV181596811
OGKY01001305
196632
Bacillota
GTC
Asp
>WENV181596825
OGKY01001508
144594
Bacillota
CAC
Val
>WENV181596833
OGKY01001751
414486
Bacillota
CCC
Gly
>WENV181596837
OGKY01001840
338128
Bacillota
TTC
Glu
>WENV181596812
OGKY01001305
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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