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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181596566
OGKY01000019
235097
Bacteroidota
TTT
Lys
>WENV181596651
OGKY01000116
235097
Bacteroidota
TTT
Lys
>WENV181596685
OGKY01000223
235097
Bacteroidota
TTT
Lys
>WENV181596747
OGKY01000543
235097
Bacteroidota
TTT
Lys
>WENV181596803
OGKY01001184
235102
Bacteroidota
CGT
Thr
>WENV181596869
OGKY01003876
338155
Bacteroidota
CTC
Glu
>WENV181596920
OGKY01011574
338486
Bacteroidota
CAT
Met
>WENV181596706
OGKY01000316
436206
Bacteroidota
TTG
Gln
>WENV181596575
OGKY01000028
338124
Bacteroidota
CCG
Arg
>WENV181596581
OGKY01000038
338132
Bacteroidota
GCA
Cys
>WENV181596582
OGKY01000038
338132
Bacteroidota
GCA
Cys
>WENV181596602
OGKY01000058
338132
Bacteroidota
GCA
Cys
>WENV181596603
OGKY01000058
338132
Bacteroidota
GCA
Cys
>WENV181596670
OGKY01000180
338132
Bacteroidota
GCA
Cys
>WENV181596554
OGKY01000007
301449
Bacteroidota
CGG
Pro
>WENV181596590
OGKY01000044
144656
Bacteroidota
GTG
His
>WENV181596560
OGKY01000013
235207
Bacteroidota
CAT
Met
>WENV181596619
OGKY01000080
235207
Bacteroidota
CAT
Met
>WENV181596620
OGKY01000080
235207
Bacteroidota
CAT
Met
>WENV181596709
OGKY01000326
235207
Bacteroidota
CAT
Met
>WENV181596628
OGKY01000087
143169
Bacteroidota
GGG
Pro
>WENV181596630
OGKY01000096
143169
Bacteroidota
GGG
Pro
>WENV181596691
OGKY01000244
143169
Bacteroidota
GGG
Pro
>WENV181596701
OGKY01000292
143169
Bacteroidota
GGG
Pro
>WENV181596599
OGKY01000049
80607
Bacteroidota
GTA
Tyr
>WENV181596615
OGKY01000068
95559
Bacteroidota
TAG
Leu
>WENV181596728
OGKY01000390
144655
Bacteroidota
GGC
Ala
>WENV181596911
OGKY01009572
338164
Bacteroidota
TTC
Glu
>WENV181596697
OGKY01000269
44852
Bacteroidota
TAA
Leu
>WENV181596717
OGKY01000343
44852
Bacteroidota
TAA
Leu
>WENV181596627
OGKY01000087
425638
Bacteroidota
CTG
Gln
>WENV181596868
OGKY01003876
23696
Bacteroidota
GCT
Ser
>WENV181596654
OGKY01000121
56823
Bacteroidota
TGA
Ser
>WENV181596699
OGKY01000284
56823
Bacteroidota
TGA
Ser
>WENV181596708
OGKY01000317
56823
Bacteroidota
TGA
Ser
>WENV181596748
OGKY01000560
56823
Bacteroidota
TGA
Ser
>WENV181596827
OGKY01001510
56823
Bacteroidota
TGA
Ser
>WENV181596681
OGKY01000216
16220
Bacteroidota
GGA
Ser
>WENV181596889
OGKY01005635
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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