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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181600372
OGLE01000020
235097
Bacteroidota
TTT
Lys
>WENV181600380
OGLE01000028
235097
Bacteroidota
TTT
Lys
>WENV181600473
OGLE01000145
235097
Bacteroidota
TTT
Lys
>WENV181600740
OGLE01001180
95987
Bacteroidota
CAA
Leu
>WENV181600457
OGLE01000125
339412
Bacteroidota
GGT
Thr
>WENV181600979
OGLE01003793
235102
Bacteroidota
CGT
Thr
>WENV181601232
OGLE01011907
146761
Bacteroidota
GAT
Ile
>WENV181600643
OGLE01000626
243025
Bacteroidota
CAT
Met
>WENV181600634
OGLE01000602
126966
Bacteroidota
TAC
Val
>WENV181600672
OGLE01000767
338155
Bacteroidota
CTC
Glu
>WENV181600381
OGLE01000028
126965
Bacteroidota
GGG
Pro
>WENV181601374
OGLE01025169
153993
Bacteroidota
GAT
Ile
>WENV181601159
OGLE01008488
343138
Bacteroidota
CCT
Arg
>WENV181601193
OGLE01010006
46165
Bacteroidota
TGA
Ser
>WENV181600589
OGLE01000395
24174
Bacteroidota
GCT
Ser
>WENV181601017
OGLE01004533
338486
Bacteroidota
CAT
Met
>WENV181600612
OGLE01000494
415410
Bacteroidota
TTG
Gln
>WENV181600458
OGLE01000125
237797
Bacteroidota
CCA
Trp
>WENV181601392
OGLE01028385
59689
Bacteroidota
CAG
Leu
>WENV181600555
OGLE01000334
412479
Bacteroidota
TTG
Gln
>WENV181600744
OGLE01001202
155123
Bacteroidota
GTT
Asn
>WENV181601126
OGLE01007149
344692
Bacteroidota
GGT
Thr
>WENV181600650
OGLE01000665
145504
Bacteroidota
TGT
Thr
>WENV181600778
OGLE01001415
341950
Bacteroidota
>WENV181600801
OGLE01001506
341950
Bacteroidota
>WENV181600542
OGLE01000290
338124
Bacteroidota
CCG
Arg
>WENV181600603
OGLE01000464
338124
Bacteroidota
CCG
Arg
>WENV181600822
OGLE01001620
168744
Bacteroidota
GTG
His
>WENV181601344
OGLE01021077
238121
Bacteroidota
CTT
Lys
>WENV181600881
OGLE01002028
126641
Bacteroidota
TAC
Val
>WENV181600958
OGLE01003276
126641
Bacteroidota
TAC
Val
>WENV181601052
OGLE01005178
126641
Bacteroidota
TAC
Val
>WENV181601067
OGLE01005690
338132
Bacteroidota
GCA
Cys
>WENV181601128
OGLE01007235
338132
Bacteroidota
GCA
Cys
>WENV181600738
OGLE01001162
37076
Bacteroidota
TAA
Leu
>WENV181600996
OGLE01004218
58714
Bacteroidota
CAA
Leu
>WENV181600963
OGLE01003437
235165
Bacteroidota
CCA
Trp
>WENV181600544
OGLE01000297
144933
Bacteroidota
TCT
Arg
>WENV181600805
OGLE01001512
144656
Bacteroidota
GTG
His
>WENV181600491
OGLE01000178
235207
Bacteroidota
CAT
Met
>WENV181600657
OGLE01000696
235207
Bacteroidota
CAT
Met
>WENV181600919
OGLE01002580
144596
Bacteroidota
GGC
Ala
>WENV181600839
OGLE01001724
80607
Bacteroidota
GTA
Tyr
>WENV181600911
OGLE01002436
80607
Bacteroidota
GTA
Tyr
>WENV181600877
OGLE01001981
344769
Bacteroidota
CTC
Glu
>WENV181600577
OGLE01000370
154643
Bacteroidota
CAT
Met
>WENV181600425
OGLE01000079
144590
Bacteroidota
GTT
Asn
>WENV181600934
OGLE01002734
95559
Bacteroidota
TAG
Leu
>WENV181601019
OGLE01004583
95559
Bacteroidota
TAG
Leu
>WENV181600391
OGLE01000035
419272
Bacteroidota
CTG
Gln
>WENV181600745
OGLE01001222
419272
Bacteroidota
CTG
Gln
>WENV181600477
OGLE01000154
144655
Bacteroidota
GGC
Ala
>WENV181601042
OGLE01005081
127277
Bacteroidota
TAC
Val
>WENV181601016
OGLE01004484
144639
Bacteroidota
GGC
Ala
>WENV181601304
OGLE01016863
338164
Bacteroidota
TTC
Glu
>WENV181601201
OGLE01010189
95875
Bacteroidota
TAG
Leu
>WENV181601278
OGLE01014796
151121
Bacteroidota
CAT
Met
>WENV181601024
OGLE01004700
44852
Bacteroidota
TAA
Leu
>WENV181601056
OGLE01005232
280513
Bacteroidota
TTT
Lys
>WENV181600595
OGLE01000435
150485
Bacteroidota
GTT
Asn
>WENV181600362
OGLE01000008
50727
Bacteroidota
TGA
Ser
>WENV181600688
OGLE01000844
50727
Bacteroidota
TGA
Ser
>WENV181600836
OGLE01001715
50727
Bacteroidota
TGA
Ser
>WENV181600820
OGLE01001613
132360
Bacteroidota
GGG
Pro
>WENV181600928
OGLE01002599
132360
Bacteroidota
GGG
Pro
>WENV181600785
OGLE01001431
425638
Bacteroidota
CTG
Gln
>WENV181600840
OGLE01001732
425638
Bacteroidota
CTG
Gln
>WENV181600392
OGLE01000035
19317
Bacteroidota
GGA
Ser
>WENV181600968
OGLE01003607
19317
Bacteroidota
GGA
Ser
>WENV181600763
OGLE01001306
353927
Bacteroidota
TTC
Glu
>WENV181600764
OGLE01001306
353927
Bacteroidota
TTC
Glu
>WENV181600799
OGLE01001498
353927
Bacteroidota
TTC
Glu
>WENV181600671
OGLE01000767
23696
Bacteroidota
GCT
Ser
>WENV181601167
OGLE01008865
414426
Bacteroidota
CTG
Gln
>WENV181600545
OGLE01000301
16224
Bacteroidota
GGA
Ser
>WENV181600630
OGLE01000569
151960
Bacteroidota
GGC
Ala
>WENV181600753
OGLE01001257
338125
Bacteroidota
CCT
Arg
>WENV181601371
OGLE01025142
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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