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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181609834
OGLO01003856
24650
Bacillota
TAA
Leu
>WENV181609856
OGLO01005474
235098
Bacillota
GAC
Val
>WENV181609754
OGLO01001214
338152
Bacillota
TTC
Glu
>WENV181609869
OGLO01006931
44854
Bacillota
TGA
Ser
>WENV181609797
OGLO01002274
144577
Bacillota
GAT
Ile
>WENV181609697
OGLO01000151
59312
Bacillota
CAG
Leu
>WENV181609728
OGLO01000380
59312
Bacillota
CAG
Leu
>WENV181609702
OGLO01000181
338147
Bacillota
CTC
Glu
>WENV181609891
OGLO01010799
235150
Bacillota
TGC
Ala
>WENV181609771
OGLO01001416
429429
Bacillota
CCA
Trp
>WENV181609727
OGLO01000380
44859
Bacillota
AAG
Leu
>WENV181609876
OGLO01007799
11034
Bacillota
GGA
Ser
>WENV181609886
OGLO01009393
338550
Bacillota
>WENV181609909
OGLO01013389
235079
Bacillota
GAA
Phe
>WENV181609748
OGLO01001022
295714
Bacillota
GCC
Gly
>WENV181609843
OGLO01004704
144763
Bacillota
TGG
Pro
>WENV181609796
OGLO01002274
235087
Bacillota
TGC
Ala
>WENV181609861
OGLO01006049
338149
Bacillota
CTC
Glu
>WENV181609840
OGLO01004704
144766
Bacillota
CAT
Met
>WENV181609903
OGLO01012627
245298
Bacillota
CGG
Pro
>WENV181609746
OGLO01000932
380750
Bacillota
TGT
Thr
>WENV181609753
OGLO01001214
287000
Bacillota
GTT
Asn
>WENV181609845
OGLO01004704
411585
Bacillota
GCA
Cys
>WENV181609712
OGLO01000243
100326
Bacillota
GTA
Tyr
>WENV181609902
OGLO01012627
411547
Bacillota
CTG
Gln
>WENV181609870
OGLO01006931
4624
Bacillota
GCT
Ser
>WENV181609907
OGLO01013299
198159
Bacillota
CAT
Met
>WENV181609757
OGLO01001268
235289
Bacillota
GTT
Asn
>WENV181609914
OGLO01013640
411549
Bacillota
TTG
Gln
>WENV181609701
OGLO01000175
235142
Bacillota
CTT
Lys
>WENV181609758
OGLO01001275
235142
Bacillota
CTT
Lys
>WENV181609844
OGLO01004704
144767
Bacillota
GTG
His
>WENV181609867
OGLO01006574
148188
Bacillota
CCG
Arg
>WENV181609654
OGLO01000013
256380
Bacillota
>WENV181609847
OGLO01004704
235288
Bacillota
TAC
Val
>WENV181609889
OGLO01010335
411739
Bacillota
TCC
Gly
>WENV181609930
OGLO01021208
411739
Bacillota
TCC
Gly
>WENV181609919
OGLO01016728
235124
Bacillota
TGG
Pro
>WENV181609743
OGLO01000895
237963
Bacillota
TTT
Lys
>WENV181609859
OGLO01006000
338129
Bacillota
TGT
Thr
>WENV181609730
OGLO01000425
238974
Bacillota
GAA
Phe
>WENV181609862
OGLO01006049
144621
Bacillota
GTT
Asn
>WENV181609842
OGLO01004704
235292
Bacillota
CCA
Trp
>WENV181609887
OGLO01009690
58712
Bacillota
CAG
Leu
>WENV181609708
OGLO01000238
144762
Bacillota
TCT
Arg
>WENV181609905
OGLO01012873
272992
Bacillota
CTT
Lys
>WENV181609660
OGLO01000024
414486
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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