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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181623530
OGMI01000802
152473
Fusobacteriota
CAT
Met
>WENV181623576
OGMI01001486
144694
Fusobacteriota
CAT
Met
>WENV181623597
OGMI01002259
169674
Fusobacteriota
TGG
Pro
>WENV181623529
OGMI01000802
156979
Fusobacteriota
TCT
Arg
>WENV181623515
OGMI01000675
242889
Fusobacteriota
TGT
Thr
>WENV181623508
OGMI01000616
248710
Fusobacteriota
GTT
Asn
>WENV181623543
OGMI01000889
248480
Fusobacteriota
TAC
Val
>WENV181623522
OGMI01000731
114254
Fusobacteriota
TGA
Ser
>WENV181623532
OGMI01000802
114254
Fusobacteriota
TGA
Ser
>WENV181623523
OGMI01000731
17193
Fusobacteriota
GCT
Ser
>WENV181623526
OGMI01000798
390517
Fusobacteriota
TTG
Gln
>WENV181623528
OGMI01000802
248546
Fusobacteriota
TTT
Lys
>WENV181623588
OGMI01002020
156835
Fusobacteriota
CCT
Arg
>WENV181623673
OGMI01013556
415120
Fusobacteriota
GCA
Cys
>WENV181623516
OGMI01000675
113605
Fusobacteriota
TAG
Leu
>WENV181623531
OGMI01000802
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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