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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181626806
OGMM01000747
144612
Bacillota
TCT
Arg
>WENV181626924
OGMM01007547
154063
Bacillota
CGG
Pro
>WENV181626641
OGMM01000008
267556
Bacillota
TAC
Val
>WENV181626881
OGMM01002791
235098
Bacillota
GAC
Val
>WENV181626792
OGMM01000623
44854
Bacillota
TGA
Ser
>WENV181626877
OGMM01002487
44854
Bacillota
TGA
Ser
>WENV181626833
OGMM01001129
59312
Bacillota
CAG
Leu
>WENV181626916
OGMM01006095
162003
Bacillota
GTC
Asp
>WENV181626853
OGMM01001718
338147
Bacillota
CTC
Glu
>WENV181626858
OGMM01001854
338147
Bacillota
CTC
Glu
>WENV181626875
OGMM01002357
235150
Bacillota
TGC
Ala
>WENV181626915
OGMM01005356
235137
Bacillota
TGC
Ala
>WENV181626857
OGMM01001801
235294
Bacillota
TGC
Ala
>WENV181626862
OGMM01001882
182792
Bacillota
GTC
Asp
>WENV181626832
OGMM01001129
44859
Bacillota
AAG
Leu
>WENV181626850
OGMM01001689
11034
Bacillota
GGA
Ser
>WENV181626867
OGMM01001980
235079
Bacillota
GAA
Phe
>WENV181626871
OGMM01002301
16266
Bacillota
GCT
Ser
>WENV181626813
OGMM01000821
338149
Bacillota
CTC
Glu
>WENV181626837
OGMM01001165
245298
Bacillota
CGG
Pro
>WENV181626836
OGMM01001165
411547
Bacillota
CTG
Gln
>WENV181626793
OGMM01000623
4624
Bacillota
GCT
Ser
>WENV181626878
OGMM01002487
4624
Bacillota
GCT
Ser
>WENV181626863
OGMM01001882
235095
Bacillota
GGT
Thr
>WENV181626872
OGMM01002306
419639
Bacillota
GCA
Cys
>WENV181626826
OGMM01000963
411549
Bacillota
TTG
Gln
>WENV181626805
OGMM01000720
235142
Bacillota
CTT
Lys
>WENV181626879
OGMM01002660
148188
Bacillota
CCG
Arg
>WENV181626864
OGMM01001893
80612
Bacillota
GTA
Tyr
>WENV181626711
OGMM01000166
256380
Bacillota
>WENV181626880
OGMM01002714
235124
Bacillota
TGG
Pro
>WENV181626848
OGMM01001647
338129
Bacillota
TGT
Thr
>WENV181626882
OGMM01002892
144583
Bacillota
ACG
Arg
>WENV181626933
OGMM01008887
144652
Bacillota
GTC
Asp
>WENV181626752
OGMM01000405
238974
Bacillota
GAA
Phe
>WENV181626814
OGMM01000821
144621
Bacillota
GTT
Asn
>WENV181626827
OGMM01001056
235113
Bacillota
GAA
Phe
>WENV181626884
OGMM01002964
277200
Bacillota
GGC
Ala
>WENV181626892
OGMM01003320
245296
Bacillota
CCC
Gly
>WENV181626926
OGMM01007572
245296
Bacillota
CCC
Gly
>WENV181626736
OGMM01000314
344240
Bacillota
GCC
Gly
>WENV181626828
OGMM01001059
144594
Bacillota
CAC
Val
>WENV181626740
OGMM01000332
95563
Bacillota
GTA
Tyr
>WENV181626756
OGMM01000419
114075
Bacillota
TAG
Leu
>WENV181626804
OGMM01000717
238945
Bacillota
GCC
Gly
>WENV181626913
OGMM01004862
338128
Bacillota
TTC
Glu
>WENV181626887
OGMM01003098
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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