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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181636530
OGNA01000347
338155
Bacteroidota
CTC
Glu
>WENV181636557
OGNA01000512
95618
Bacteroidota
TAG
Leu
>WENV181636462
OGNA01000108
415410
Bacteroidota
TTG
Gln
>WENV181636445
OGNA01000086
411543
Bacteroidota
CTG
Gln
>WENV181636441
OGNA01000066
235182
Bacteroidota
>WENV181636542
OGNA01000407
272983
Bacteroidota
CGT
Thr
>WENV181636482
OGNA01000139
126641
Bacteroidota
TAC
Val
>WENV181636483
OGNA01000139
126641
Bacteroidota
TAC
Val
>WENV181636518
OGNA01000293
338132
Bacteroidota
GCA
Cys
>WENV181636520
OGNA01000294
338132
Bacteroidota
GCA
Cys
>WENV181636536
OGNA01000382
338132
Bacteroidota
GCA
Cys
>WENV181636531
OGNA01000360
144688
Bacteroidota
CAT
Met
>WENV181636435
OGNA01000061
181746
Bacteroidota
GGC
Ala
>WENV181636437
OGNA01000062
301449
Bacteroidota
CGG
Pro
>WENV181636505
OGNA01000224
301449
Bacteroidota
CGG
Pro
>WENV181636418
OGNA01000021
144933
Bacteroidota
TCT
Arg
>WENV181636524
OGNA01000312
144933
Bacteroidota
TCT
Arg
>WENV181636496
OGNA01000170
235207
Bacteroidota
CAT
Met
>WENV181636442
OGNA01000067
144596
Bacteroidota
GGC
Ala
>WENV181636521
OGNA01000301
80607
Bacteroidota
GTA
Tyr
>WENV181636534
OGNA01000372
16999
Bacteroidota
GGA
Ser
>WENV181636420
OGNA01000025
52358
Bacteroidota
TGA
Ser
>WENV181636443
OGNA01000070
52358
Bacteroidota
TGA
Ser
>WENV181636475
OGNA01000127
52358
Bacteroidota
TGA
Ser
>WENV181636562
OGNA01000554
52358
Bacteroidota
TGA
Ser
>WENV181636525
OGNA01000316
338314
Bacteroidota
CCT
Arg
>WENV181636612
OGNA01001853
338165
Bacteroidota
GGT
Thr
>WENV181636424
OGNA01000032
19528
Bacteroidota
GGA
Ser
>WENV181636447
OGNA01000092
132360
Bacteroidota
GGG
Pro
>WENV181636501
OGNA01000193
132360
Bacteroidota
GGG
Pro
>WENV181636432
OGNA01000051
425638
Bacteroidota
CTG
Gln
>WENV181636446
OGNA01000092
425638
Bacteroidota
CTG
Gln
>WENV181636481
OGNA01000138
239647
Bacteroidota
TTT
Lys
>WENV181636476
OGNA01000130
19317
Bacteroidota
GGA
Ser
>WENV181636529
OGNA01000347
23696
Bacteroidota
GCT
Ser
>WENV181636412
OGNA01000014
411629
Bacteroidota
TTG
Gln
>WENV181636517
OGNA01000287
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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