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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181644582
OGNM01000262
24650
Bacillota
TAA
Leu
>WENV181644926
OGNM01005281
196621
Bacillota
GTC
Asp
>WENV181644872
OGNM01003895
309417
Bacillota
GGC
Ala
>WENV181644809
OGNM01002480
144612
Bacillota
TCT
Arg
>WENV181644813
OGNM01002508
144612
Bacillota
TCT
Arg
>WENV181644939
OGNM01005924
144612
Bacillota
TCT
Arg
>WENV181645029
OGNM01010606
144612
Bacillota
TCT
Arg
>WENV181644665
OGNM01000473
235098
Bacillota
GAC
Val
>WENV181644921
OGNM01005196
235098
Bacillota
GAC
Val
>WENV181645001
OGNM01008634
235098
Bacillota
GAC
Val
>WENV181644743
OGNM01001177
44854
Bacillota
TGA
Ser
>WENV181644955
OGNM01006378
44854
Bacillota
TGA
Ser
>WENV181645219
OGNM01050181
425593
Bacillota
CCC
Gly
>WENV181645200
OGNM01044483
144577
Bacillota
GAT
Ile
>WENV181644441
OGNM01000029
37071
Bacillota
TGA
Ser
>WENV181644504
OGNM01000105
59312
Bacillota
CAG
Leu
>WENV181645095
OGNM01018726
238910
Bacillota
CTT
Lys
>WENV181644545
OGNM01000182
338147
Bacillota
CTC
Glu
>WENV181644623
OGNM01000371
338147
Bacillota
CTC
Glu
>WENV181644728
OGNM01001007
338147
Bacillota
CTC
Glu
>WENV181644589
OGNM01000279
235114
Bacillota
TTT
Lys
>WENV181644569
OGNM01000231
429429
Bacillota
CCA
Trp
>WENV181644763
OGNM01001452
313454
Bacillota
GAA
Phe
>WENV181644963
OGNM01006772
41154
Bacillota
TAA
Leu
>WENV181644408
OGNM01000004
44859
Bacillota
AAG
Leu
>WENV181644503
OGNM01000105
44859
Bacillota
AAG
Leu
>WENV181644719
OGNM01000914
11034
Bacillota
GGA
Ser
>WENV181645088
OGNM01017186
235079
Bacillota
GAA
Phe
>WENV181645208
OGNM01045983
296878
Bacillota
GTT
Asn
>WENV181645199
OGNM01044483
235087
Bacillota
TGC
Ala
>WENV181645043
OGNM01011806
338149
Bacillota
CTC
Glu
>WENV181644851
OGNM01003338
245298
Bacillota
CGG
Pro
>WENV181645064
OGNM01014005
245298
Bacillota
CGG
Pro
>WENV181644702
OGNM01000771
37269
Bacillota
TGA
Ser
>WENV181645204
OGNM01045010
340131
Bacillota
GTT
Asn
>WENV181645123
OGNM01021815
155089
Bacillota
CAT
Met
>WENV181645160
OGNM01028778
152492
Bacillota
GGG
Pro
>WENV181644587
OGNM01000279
144610
Bacillota
GTG
His
>WENV181645068
OGNM01015187
240017
Bacillota
GCC
Gly
>WENV181644722
OGNM01000942
411547
Bacillota
CTG
Gln
>WENV181644850
OGNM01003338
411547
Bacillota
CTG
Gln
>WENV181644744
OGNM01001177
4624
Bacillota
GCT
Ser
>WENV181644956
OGNM01006378
4624
Bacillota
GCT
Ser
>WENV181645210
OGNM01045983
248683
Bacillota
TTT
Lys
>WENV181644927
OGNM01005281
235095
Bacillota
GGT
Thr
>WENV181644928
OGNM01005281
235095
Bacillota
GGT
Thr
>WENV181645209
OGNM01045983
344183
Bacillota
CTG
Gln
>WENV181645194
OGNM01041304
241471
Bacillota
TGC
Ala
>WENV181645052
OGNM01012716
304759
Bacillota
TAC
Val
>WENV181645212
OGNM01045983
304759
Bacillota
TAC
Val
>WENV181644942
OGNM01005963
411549
Bacillota
TTG
Gln
>WENV181645211
OGNM01045983
243398
Bacillota
TTC
Glu
>WENV181644526
OGNM01000133
235142
Bacillota
CTT
Lys
>WENV181644869
OGNM01003788
148188
Bacillota
CCG
Arg
>WENV181644873
OGNM01003901
148188
Bacillota
CCG
Arg
>WENV181644995
OGNM01008162
298639
Bacillota
GTT
Asn
>WENV181644711
OGNM01000822
80612
Bacillota
GTA
Tyr
>WENV181644746
OGNM01001216
235124
Bacillota
TGG
Pro
>WENV181644993
OGNM01008076
235124
Bacillota
TGG
Pro
>WENV181644779
OGNM01001643
144583
Bacillota
ACG
Arg
>WENV181644960
OGNM01006534
247734
Bacillota
TGC
Ala
>WENV181644925
OGNM01005281
235171
Bacillota
CCA
Trp
>WENV181644824
OGNM01002793
144621
Bacillota
GTT
Asn
>WENV181644438
OGNM01000029
235113
Bacillota
GAA
Phe
>WENV181644628
OGNM01000376
277200
Bacillota
GGC
Ala
>WENV181644709
OGNM01000806
58712
Bacillota
CAG
Leu
>WENV181644920
OGNM01005035
58712
Bacillota
CAG
Leu
>WENV181644726
OGNM01000985
245296
Bacillota
CCC
Gly
>WENV181645198
OGNM01044409
272992
Bacillota
CTT
Lys
>WENV181644431
OGNM01000020
344240
Bacillota
GCC
Gly
>WENV181644740
OGNM01001095
196632
Bacillota
GTC
Asp
>WENV181644895
OGNM01004332
144594
Bacillota
CAC
Val
>WENV181644654
OGNM01000427
95563
Bacillota
GTA
Tyr
>WENV181644671
OGNM01000541
414486
Bacillota
CCC
Gly
>WENV181644848
OGNM01003335
338128
Bacillota
TTC
Glu
>WENV181644741
OGNM01001095
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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