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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181648624
OGNR01000324
24650
Bacillota
TAA
Leu
>WENV181648659
OGNR01000556
144612
Bacillota
TCT
Arg
>WENV181648729
OGNR01001327
144612
Bacillota
TCT
Arg
>WENV181648508
OGNR01000034
267556
Bacillota
TAC
Val
>WENV181648755
OGNR01001720
235098
Bacillota
GAC
Val
>WENV181648722
OGNR01001234
338152
Bacillota
TTC
Glu
>WENV181648844
OGNR01003528
148239
Bacillota
TCT
Arg
>WENV181648817
OGNR01002957
44854
Bacillota
TGA
Ser
>WENV181648784
OGNR01002251
37071
Bacillota
TGA
Ser
>WENV181648717
OGNR01001190
59312
Bacillota
CAG
Leu
>WENV181648687
OGNR01000931
338147
Bacillota
CTC
Glu
>WENV181648760
OGNR01001808
338147
Bacillota
CTC
Glu
>WENV181649046
OGNR01019521
235150
Bacillota
TGC
Ala
>WENV181649067
OGNR01024403
235150
Bacillota
TGC
Ala
>WENV181649011
OGNR01014174
235137
Bacillota
TGC
Ala
>WENV181649105
OGNR01038259
235114
Bacillota
TTT
Lys
>WENV181648803
OGNR01002660
182792
Bacillota
GTC
Asp
>WENV181648716
OGNR01001190
44859
Bacillota
AAG
Leu
>WENV181648773
OGNR01002023
44859
Bacillota
AAG
Leu
>WENV181648560
OGNR01000126
11034
Bacillota
GGA
Ser
>WENV181648671
OGNR01000676
11034
Bacillota
GGA
Ser
>WENV181648845
OGNR01003528
156937
Bacillota
GTG
His
>WENV181648968
OGNR01009792
16266
Bacillota
GCT
Ser
>WENV181648757
OGNR01001743
338149
Bacillota
CTC
Glu
>WENV181648880
OGNR01004596
338149
Bacillota
CTC
Glu
>WENV181648990
OGNR01011763
245298
Bacillota
CGG
Pro
>WENV181648897
OGNR01005529
37269
Bacillota
TGA
Ser
>WENV181648931
OGNR01007618
153911
Bacillota
GAT
Ile
>WENV181648710
OGNR01001079
100326
Bacillota
GTA
Tyr
>WENV181649103
OGNR01038259
144610
Bacillota
GTG
His
>WENV181648714
OGNR01001122
411547
Bacillota
CTG
Gln
>WENV181648818
OGNR01002957
4624
Bacillota
GCT
Ser
>WENV181648564
OGNR01000127
235095
Bacillota
GGT
Thr
>WENV181648648
OGNR01000441
235095
Bacillota
GGT
Thr
>WENV181648727
OGNR01001312
235095
Bacillota
GGT
Thr
>WENV181648804
OGNR01002660
235095
Bacillota
GGT
Thr
>WENV181648878
OGNR01004535
419639
Bacillota
GCA
Cys
>WENV181648651
OGNR01000480
411549
Bacillota
TTG
Gln
>WENV181648718
OGNR01001224
411549
Bacillota
TTG
Gln
>WENV181648545
OGNR01000086
235142
Bacillota
CTT
Lys
>WENV181648788
OGNR01002275
148188
Bacillota
CCG
Arg
>WENV181648562
OGNR01000126
80612
Bacillota
GTA
Tyr
>WENV181648736
OGNR01001476
80612
Bacillota
GTA
Tyr
>WENV181648824
OGNR01003156
80612
Bacillota
GTA
Tyr
>WENV181649041
OGNR01018440
256380
Bacillota
>WENV181648649
OGNR01000455
235124
Bacillota
TGG
Pro
>WENV181648668
OGNR01000616
235124
Bacillota
TGG
Pro
>WENV181648946
OGNR01008279
235124
Bacillota
TGG
Pro
>WENV181648561
OGNR01000126
338129
Bacillota
TGT
Thr
>WENV181648587
OGNR01000216
338129
Bacillota
TGT
Thr
>WENV181648785
OGNR01002267
338129
Bacillota
TGT
Thr
>WENV181648654
OGNR01000506
144583
Bacillota
ACG
Arg
>WENV181648756
OGNR01001739
144583
Bacillota
ACG
Arg
>WENV181648828
OGNR01003283
247734
Bacillota
TGC
Ala
>WENV181648889
OGNR01004956
247734
Bacillota
TGC
Ala
>WENV181649037
OGNR01017714
419877
Bacillota
TCC
Gly
>WENV181648920
OGNR01006529
235171
Bacillota
CCA
Trp
>WENV181648924
OGNR01007004
235171
Bacillota
CCA
Trp
>WENV181648633
OGNR01000385
238974
Bacillota
GAA
Phe
>WENV181649093
OGNR01032684
238974
Bacillota
GAA
Phe
>WENV181648684
OGNR01000883
144621
Bacillota
GTT
Asn
>WENV181648733
OGNR01001417
144621
Bacillota
GTT
Asn
>WENV181648758
OGNR01001743
144621
Bacillota
GTT
Asn
>WENV181648881
OGNR01004596
144621
Bacillota
GTT
Asn
>WENV181648886
OGNR01004707
235113
Bacillota
GAA
Phe
>WENV181648613
OGNR01000278
58712
Bacillota
CAG
Leu
>WENV181648694
OGNR01000998
58712
Bacillota
CAG
Leu
>WENV181648823
OGNR01003156
58712
Bacillota
CAG
Leu
>WENV181648581
OGNR01000187
245296
Bacillota
CCC
Gly
>WENV181648666
OGNR01000604
245296
Bacillota
CCC
Gly
>WENV181648877
OGNR01004535
344240
Bacillota
GCC
Gly
>WENV181648780
OGNR01002127
144594
Bacillota
CAC
Val
>WENV181648592
OGNR01000230
95563
Bacillota
GTA
Tyr
>WENV181648652
OGNR01000496
114075
Bacillota
TAG
Leu
>WENV181648901
OGNR01005562
238945
Bacillota
GCC
Gly
>WENV181648902
OGNR01005562
238945
Bacillota
GCC
Gly
>WENV181648650
OGNR01000461
249259
Bacillota
GCC
Gly
>WENV181648800
OGNR01002627
338128
Bacillota
TTC
Glu
>WENV181648876
OGNR01004535
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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