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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181651097
OGNV01000814
235097
Bacteroidota
TTT
Lys
>WENV181651061
OGNV01000667
235102
Bacteroidota
CGT
Thr
>WENV181651303
OGNV01002736
144657
Bacteroidota
CGG
Pro
>WENV181650984
OGNV01000393
243025
Bacteroidota
CAT
Met
>WENV181651653
OGNV01026222
339341
Bacteroidota
GGT
Thr
>WENV181651525
OGNV01010197
343138
Bacteroidota
CCT
Arg
>WENV181651331
OGNV01003277
58715
Bacteroidota
GAG
Leu
>WENV181651519
OGNV01009867
46165
Bacteroidota
TGA
Ser
>WENV181650872
OGNV01000135
95618
Bacteroidota
TAG
Leu
>WENV181651181
OGNV01001341
95618
Bacteroidota
TAG
Leu
>WENV181651188
OGNV01001398
338486
Bacteroidota
CAT
Met
>WENV181650944
OGNV01000288
48053
Bacteroidota
TGA
Ser
>WENV181650962
OGNV01000314
48053
Bacteroidota
TGA
Ser
>WENV181650988
OGNV01000402
48053
Bacteroidota
TGA
Ser
>WENV181651045
OGNV01000619
48053
Bacteroidota
TGA
Ser
>WENV181650971
OGNV01000335
415410
Bacteroidota
TTG
Gln
>WENV181651067
OGNV01000713
415410
Bacteroidota
TTG
Gln
>WENV181651463
OGNV01006855
415410
Bacteroidota
TTG
Gln
>WENV181651009
OGNV01000480
411543
Bacteroidota
CTG
Gln
>WENV181651122
OGNV01000911
411543
Bacteroidota
CTG
Gln
>WENV181651598
OGNV01017755
59689
Bacteroidota
CAG
Leu
>WENV181651121
OGNV01000907
179643
Bacteroidota
GTC
Asp
>WENV181650848
OGNV01000103
80835
Bacteroidota
GTA
Tyr
>WENV181651231
OGNV01001804
235182
Bacteroidota
>WENV181651011
OGNV01000488
338124
Bacteroidota
CCG
Arg
>WENV181651685
OGNV01031969
238121
Bacteroidota
CTT
Lys
>WENV181651686
OGNV01031969
238121
Bacteroidota
CTT
Lys
>WENV181651031
OGNV01000542
338132
Bacteroidota
GCA
Cys
>WENV181651171
OGNV01001241
338132
Bacteroidota
GCA
Cys
>WENV181651215
OGNV01001586
338132
Bacteroidota
GCA
Cys
>WENV181651256
OGNV01001991
338132
Bacteroidota
GCA
Cys
>WENV181651438
OGNV01005974
338132
Bacteroidota
GCA
Cys
>WENV181650833
OGNV01000082
144688
Bacteroidota
CAT
Met
>WENV181651533
OGNV01010863
58714
Bacteroidota
CAA
Leu
>WENV181651149
OGNV01001138
144933
Bacteroidota
TCT
Arg
>WENV181651221
OGNV01001666
144933
Bacteroidota
TCT
Arg
>WENV181651400
OGNV01004306
144933
Bacteroidota
TCT
Arg
>WENV181651058
OGNV01000664
144656
Bacteroidota
GTG
His
>WENV181651001
OGNV01000460
235207
Bacteroidota
CAT
Met
>WENV181651027
OGNV01000530
235207
Bacteroidota
CAT
Met
>WENV181651028
OGNV01000530
235207
Bacteroidota
CAT
Met
>WENV181651707
OGNV01037278
144659
Bacteroidota
GTG
His
>WENV181650991
OGNV01000406
144596
Bacteroidota
GGC
Ala
>WENV181651193
OGNV01001421
80607
Bacteroidota
GTA
Tyr
>WENV181651087
OGNV01000771
16999
Bacteroidota
GGA
Ser
>WENV181650870
OGNV01000131
154643
Bacteroidota
CAT
Met
>WENV181650780
OGNV01000020
419272
Bacteroidota
CTG
Gln
>WENV181650882
OGNV01000144
144655
Bacteroidota
GGC
Ala
>WENV181651559
OGNV01013655
338164
Bacteroidota
TTC
Glu
>WENV181651286
OGNV01002511
95875
Bacteroidota
TAG
Leu
>WENV181651297
OGNV01002690
151121
Bacteroidota
CAT
Met
>WENV181651120
OGNV01000901
240012
Bacteroidota
CCC
Gly
>WENV181650826
OGNV01000067
44852
Bacteroidota
TAA
Leu
>WENV181650934
OGNV01000265
44852
Bacteroidota
TAA
Leu
>WENV181651569
OGNV01013970
147439
Bacteroidota
TCT
Arg
>WENV181650952
OGNV01000299
150485
Bacteroidota
GTT
Asn
>WENV181650953
OGNV01000299
150485
Bacteroidota
GTT
Asn
>WENV181650782
OGNV01000020
132360
Bacteroidota
GGG
Pro
>WENV181650940
OGNV01000281
132360
Bacteroidota
GGG
Pro
>WENV181651030
OGNV01000537
132360
Bacteroidota
GGG
Pro
>WENV181650905
OGNV01000190
239647
Bacteroidota
TTT
Lys
>WENV181651307
OGNV01002839
239647
Bacteroidota
TTT
Lys
>WENV181651556
OGNV01013240
19317
Bacteroidota
GGA
Ser
>WENV181651224
OGNV01001742
353927
Bacteroidota
TTC
Glu
>WENV181650863
OGNV01000120
414426
Bacteroidota
CTG
Gln
>WENV181651059
OGNV01000664
16224
Bacteroidota
GGA
Ser
>WENV181650781
OGNV01000020
16220
Bacteroidota
GGA
Ser
>WENV181650762
OGNV01000011
338125
Bacteroidota
CCT
Arg
>WENV181651000
OGNV01000459
338125
Bacteroidota
CCT
Arg
>WENV181651115
OGNV01000877
338125
Bacteroidota
CCT
Arg
>WENV181650998
OGNV01000439
411629
Bacteroidota
TTG
Gln
>WENV181651142
OGNV01001021
411629
Bacteroidota
TTG
Gln
>WENV181651500
OGNV01008569
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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