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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181655658
OGOB01000367
95987
Bacteroidota
CAA
Leu
>WENV181656056
OGOB01016349
339412
Bacteroidota
GGT
Thr
>WENV181655970
OGOB01007501
235102
Bacteroidota
CGT
Thr
>WENV181655516
OGOB01000062
267954
Bacteroidota
GCC
Gly
>WENV181656148
OGOB01037368
267954
Bacteroidota
GCC
Gly
>WENV181655460
OGOB01000024
243025
Bacteroidota
CAT
Met
>WENV181655821
OGOB01001699
394247
Bacteroidota
CTC
Glu
>WENV181655704
OGOB01000622
413663
Bacteroidota
CTG
Gln
>WENV181655810
OGOB01001559
413663
Bacteroidota
CTG
Gln
>WENV181655710
OGOB01000683
136244
Bacteroidota
TAC
Val
>WENV181655940
OGOB01005636
136244
Bacteroidota
TAC
Val
>WENV181656140
OGOB01035774
237797
Bacteroidota
CCA
Trp
>WENV181655914
OGOB01003981
436206
Bacteroidota
TTG
Gln
>WENV181655910
OGOB01003873
412479
Bacteroidota
TTG
Gln
>WENV181655639
OGOB01000291
147147
Bacteroidota
GTG
His
>WENV181655517
OGOB01000062
145504
Bacteroidota
TGT
Thr
>WENV181655537
OGOB01000089
338132
Bacteroidota
GCA
Cys
>WENV181655918
OGOB01004308
37076
Bacteroidota
TAA
Leu
>WENV181656086
OGOB01022357
235165
Bacteroidota
CCA
Trp
>WENV181655667
OGOB01000403
141414
Bacteroidota
GGG
Pro
>WENV181655967
OGOB01007060
171336
Bacteroidota
GGC
Ala
>WENV181655671
OGOB01000417
235207
Bacteroidota
CAT
Met
>WENV181655997
OGOB01010179
235207
Bacteroidota
CAT
Met
>WENV181655933
OGOB01005145
80607
Bacteroidota
GTA
Tyr
>WENV181655491
OGOB01000044
154643
Bacteroidota
CAT
Met
>WENV181656027
OGOB01012855
144655
Bacteroidota
GGC
Ala
>WENV181655694
OGOB01000532
263771
Bacteroidota
CTT
Lys
>WENV181655532
OGOB01000083
150485
Bacteroidota
GTT
Asn
>WENV181655534
OGOB01000086
353927
Bacteroidota
TTC
Glu
>WENV181655563
OGOB01000121
353927
Bacteroidota
TTC
Glu
>WENV181656081
OGOB01020994
23696
Bacteroidota
GCT
Ser
>WENV181655467
OGOB01000031
414426
Bacteroidota
CTG
Gln
>WENV181655780
OGOB01001196
55270
Bacteroidota
TGA
Ser
>WENV181656014
OGOB01011271
338125
Bacteroidota
CCT
Arg
>WENV181655702
OGOB01000620
313363
Bacteroidota
GAA
Phe
>WENV181655770
OGOB01001061
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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