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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181664238
OGOI01001264
309417
Bacillota
GGC
Ala
>WENV181664283
OGOI01001661
37213
Bacillota
TGA
Ser
>WENV181664576
OGOI01007301
37213
Bacillota
TGA
Ser
>WENV181664316
OGOI01001916
144612
Bacillota
TCT
Arg
>WENV181664708
OGOI01015235
144612
Bacillota
TCT
Arg
>WENV181664266
OGOI01001465
267649
Bacillota
TAC
Val
>WENV181664264
OGOI01001448
235098
Bacillota
GAC
Val
>WENV181664337
OGOI01002116
235098
Bacillota
GAC
Val
>WENV181663854
OGOI01000092
338152
Bacillota
TTC
Glu
>WENV181664663
OGOI01011912
44854
Bacillota
TGA
Ser
>WENV181664557
OGOI01006794
235154
Bacillota
GTT
Asn
>WENV181664797
OGOI01028117
429443
Bacillota
GCA
Cys
>WENV181664897
OGOI01046006
246023
Bacillota
TGC
Ala
>WENV181664789
OGOI01026706
307003
Bacillota
TGC
Ala
>WENV181664009
OGOI01000323
59312
Bacillota
CAG
Leu
>WENV181664432
OGOI01003367
59312
Bacillota
CAG
Leu
>WENV181664303
OGOI01001791
238910
Bacillota
CTT
Lys
>WENV181663883
OGOI01000107
338147
Bacillota
CTC
Glu
>WENV181664023
OGOI01000363
338147
Bacillota
CTC
Glu
>WENV181664439
OGOI01003464
338147
Bacillota
CTC
Glu
>WENV181664296
OGOI01001757
235294
Bacillota
TGC
Ala
>WENV181663865
OGOI01000092
340802
Bacillota
TTG
Gln
>WENV181663974
OGOI01000263
235114
Bacillota
TTT
Lys
>WENV181664066
OGOI01000403
429429
Bacillota
CCA
Trp
>WENV181664401
OGOI01002776
429429
Bacillota
CCA
Trp
>WENV181664536
OGOI01006046
429429
Bacillota
CCA
Trp
>WENV181663848
OGOI01000087
313454
Bacillota
GAA
Phe
>WENV181664017
OGOI01000335
313454
Bacillota
GAA
Phe
>WENV181664206
OGOI01001117
313454
Bacillota
GAA
Phe
>WENV181664223
OGOI01001188
313454
Bacillota
GAA
Phe
>WENV181664290
OGOI01001717
313454
Bacillota
GAA
Phe
>WENV181663859
OGOI01000092
41154
Bacillota
TAA
Leu
>WENV181664008
OGOI01000323
44859
Bacillota
AAG
Leu
>WENV181664638
OGOI01010606
11034
Bacillota
GGA
Ser
>WENV181664515
OGOI01005482
338149
Bacillota
CTC
Glu
>WENV181664706
OGOI01015019
245298
Bacillota
CGG
Pro
>WENV181663986
OGOI01000283
37269
Bacillota
TGA
Ser
>WENV181663853
OGOI01000092
287000
Bacillota
GTT
Asn
>WENV181664205
OGOI01001117
169968
Bacillota
CAT
Met
>WENV181664726
OGOI01016907
413152
Bacillota
TCC
Gly
>WENV181664453
OGOI01003877
173810
Bacillota
CAT
Met
>WENV181663923
OGOI01000173
173810
Bacillota
CAT
Met
>WENV181663931
OGOI01000181
162445
Bacillota
CAT
Met
>WENV181663933
OGOI01000181
162445
Bacillota
CAT
Met
>WENV181664896
OGOI01046006
201704
Bacillota
GAT
Ile
>WENV181663775
OGOI01000022
152492
Bacillota
GGG
Pro
>WENV181664097
OGOI01000555
152492
Bacillota
GGG
Pro
>WENV181663864
OGOI01000092
144610
Bacillota
GTG
His
>WENV181663773
OGOI01000020
240017
Bacillota
GCC
Gly
>WENV181664705
OGOI01015019
411547
Bacillota
CTG
Gln
>WENV181664664
OGOI01011912
4624
Bacillota
GCT
Ser
>WENV181664371
OGOI01002532
412387
Bacillota
GCA
Cys
>WENV181663823
OGOI01000054
313164
Bacillota
TTT
Lys
>WENV181664312
OGOI01001863
18852
Bacillota
GCT
Ser
>WENV181664605
OGOI01008902
235095
Bacillota
GGT
Thr
>WENV181664502
OGOI01005146
411549
Bacillota
TTG
Gln
>WENV181664736
OGOI01017691
411549
Bacillota
TTG
Gln
>WENV181663993
OGOI01000291
235142
Bacillota
CTT
Lys
>WENV181664286
OGOI01001674
235142
Bacillota
CTT
Lys
>WENV181664217
OGOI01001147
148188
Bacillota
CCG
Arg
>WENV181664686
OGOI01013087
80612
Bacillota
GTA
Tyr
>WENV181664414
OGOI01002942
256380
Bacillota
>WENV181664646
OGOI01010908
235124
Bacillota
TGG
Pro
>WENV181664737
OGOI01017762
338129
Bacillota
TGT
Thr
>WENV181664681
OGOI01012863
144583
Bacillota
ACG
Arg
>WENV181664713
OGOI01015315
247734
Bacillota
TGC
Ala
>WENV181664156
OGOI01000816
235171
Bacillota
CCA
Trp
>WENV181664504
OGOI01005159
238974
Bacillota
GAA
Phe
>WENV181664516
OGOI01005482
144621
Bacillota
GTT
Asn
>WENV181663973
OGOI01000263
235113
Bacillota
GAA
Phe
>WENV181664675
OGOI01012450
243098
Bacillota
GGT
Thr
>WENV181664771
OGOI01023486
58712
Bacillota
CAG
Leu
>WENV181664816
OGOI01030830
245296
Bacillota
CCC
Gly
>WENV181664617
OGOI01009507
272992
Bacillota
CTT
Lys
>WENV181664717
OGOI01015699
196632
Bacillota
GTC
Asp
>WENV181663863
OGOI01000092
157635
Bacillota
TCT
Arg
>WENV181664187
OGOI01001030
144594
Bacillota
CAC
Val
>WENV181664096
OGOI01000550
95563
Bacillota
GTA
Tyr
>WENV181664370
OGOI01002497
414486
Bacillota
CCC
Gly
>WENV181664302
OGOI01001784
119513
Bacillota
CAA
Leu
>WENV181664327
OGOI01002008
338128
Bacillota
TTC
Glu
>WENV181664718
OGOI01015699
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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