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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181673204
OGOO01001375
235097
Bacteroidota
TTT
Lys
>WENV181673730
OGOO01007864
95987
Bacteroidota
CAA
Leu
>WENV181674314
OGOO01044205
339412
Bacteroidota
GGT
Thr
>WENV181673450
OGOO01003402
235102
Bacteroidota
CGT
Thr
>WENV181673232
OGOO01001495
267954
Bacteroidota
GCC
Gly
>WENV181673524
OGOO01004177
144657
Bacteroidota
CGG
Pro
>WENV181673449
OGOO01003395
243025
Bacteroidota
CAT
Met
>WENV181673592
OGOO01005158
243025
Bacteroidota
CAT
Met
>WENV181673607
OGOO01005443
243025
Bacteroidota
CAT
Met
>WENV181673684
OGOO01006599
97336
Bacteroidota
CAG
Leu
>WENV181673722
OGOO01007620
153993
Bacteroidota
GAT
Ile
>WENV181674058
OGOO01019174
339341
Bacteroidota
GGT
Thr
>WENV181672447
OGOO01000008
343138
Bacteroidota
CCT
Arg
>WENV181673017
OGOO01000728
58715
Bacteroidota
GAG
Leu
>WENV181673144
OGOO01001171
46165
Bacteroidota
TGA
Ser
>WENV181672503
OGOO01000024
338486
Bacteroidota
CAT
Met
>WENV181673136
OGOO01001155
338486
Bacteroidota
CAT
Met
>WENV181673197
OGOO01001337
413663
Bacteroidota
CTG
Gln
>WENV181673198
OGOO01001337
413663
Bacteroidota
CTG
Gln
>WENV181672733
OGOO01000212
415410
Bacteroidota
TTG
Gln
>WENV181672827
OGOO01000332
415410
Bacteroidota
TTG
Gln
>WENV181672929
OGOO01000555
415410
Bacteroidota
TTG
Gln
>WENV181673414
OGOO01002909
415410
Bacteroidota
TTG
Gln
>WENV181673544
OGOO01004437
237797
Bacteroidota
CCA
Trp
>WENV181672592
OGOO01000076
59689
Bacteroidota
CAG
Leu
>WENV181673311
OGOO01001942
412479
Bacteroidota
TTG
Gln
>WENV181674426
OGOO01068118
128251
Bacteroidota
TGG
Pro
>WENV181673150
OGOO01001176
147147
Bacteroidota
GTG
His
>WENV181673151
OGOO01001176
147147
Bacteroidota
GTG
His
>WENV181673052
OGOO01000835
344692
Bacteroidota
GGT
Thr
>WENV181673077
OGOO01000953
344692
Bacteroidota
GGT
Thr
>WENV181672541
OGOO01000041
145504
Bacteroidota
TGT
Thr
>WENV181672636
OGOO01000114
341950
Bacteroidota
>WENV181673246
OGOO01001587
341950
Bacteroidota
>WENV181672998
OGOO01000697
338124
Bacteroidota
CCG
Arg
>WENV181672706
OGOO01000179
235203
Bacteroidota
TTT
Lys
>WENV181673321
OGOO01002028
235203
Bacteroidota
TTT
Lys
>WENV181672657
OGOO01000130
238121
Bacteroidota
CTT
Lys
>WENV181672658
OGOO01000130
238121
Bacteroidota
CTT
Lys
>WENV181673485
OGOO01003790
126641
Bacteroidota
TAC
Val
>WENV181672647
OGOO01000125
338132
Bacteroidota
GCA
Cys
>WENV181672871
OGOO01000446
338132
Bacteroidota
GCA
Cys
>WENV181673714
OGOO01007423
37076
Bacteroidota
TAA
Leu
>WENV181672664
OGOO01000138
58714
Bacteroidota
CAA
Leu
>WENV181672808
OGOO01000293
235165
Bacteroidota
CCA
Trp
>WENV181672662
OGOO01000135
144933
Bacteroidota
TCT
Arg
>WENV181673769
OGOO01008854
144933
Bacteroidota
TCT
Arg
>WENV181672864
OGOO01000431
144656
Bacteroidota
GTG
His
>WENV181672779
OGOO01000264
235207
Bacteroidota
CAT
Met
>WENV181672830
OGOO01000338
235207
Bacteroidota
CAT
Met
>WENV181672970
OGOO01000620
144659
Bacteroidota
GTG
His
>WENV181674192
OGOO01028744
235180
Bacteroidota
CCA
Trp
>WENV181672907
OGOO01000512
144596
Bacteroidota
GGC
Ala
>WENV181672746
OGOO01000220
80607
Bacteroidota
GTA
Tyr
>WENV181673353
OGOO01002316
238553
Bacteroidota
GAA
Phe
>WENV181674022
OGOO01017381
344769
Bacteroidota
CTC
Glu
>WENV181674023
OGOO01017381
344769
Bacteroidota
CTC
Glu
>WENV181673228
OGOO01001486
16999
Bacteroidota
GGA
Ser
>WENV181672525
OGOO01000031
80614
Bacteroidota
>WENV181672916
OGOO01000519
80614
Bacteroidota
>WENV181673260
OGOO01001660
154643
Bacteroidota
CAT
Met
>WENV181672920
OGOO01000529
95559
Bacteroidota
TAG
Leu
>WENV181672660
OGOO01000131
419272
Bacteroidota
CTG
Gln
>WENV181672589
OGOO01000074
144655
Bacteroidota
GGC
Ala
>WENV181672833
OGOO01000342
144639
Bacteroidota
GGC
Ala
>WENV181672445
OGOO01000008
338164
Bacteroidota
TTC
Glu
>WENV181673583
OGOO01004963
95875
Bacteroidota
TAG
Leu
>WENV181673106
OGOO01001077
240012
Bacteroidota
CCC
Gly
>WENV181672444
OGOO01000007
44852
Bacteroidota
TAA
Leu
>WENV181673594
OGOO01005182
44852
Bacteroidota
TAA
Leu
>WENV181672810
OGOO01000296
147439
Bacteroidota
TCT
Arg
>WENV181673076
OGOO01000915
280513
Bacteroidota
TTT
Lys
>WENV181672537
OGOO01000040
150485
Bacteroidota
GTT
Asn
>WENV181672538
OGOO01000040
150485
Bacteroidota
GTT
Asn
>WENV181672572
OGOO01000057
411550
Bacteroidota
CTG
Gln
>WENV181673417
OGOO01002919
196394
Bacteroidota
GTC
Asp
>WENV181673629
OGOO01005719
196394
Bacteroidota
GTC
Asp
>WENV181673415
OGOO01002919
196394
Bacteroidota
GTC
Asp
>WENV181673416
OGOO01002919
196394
Bacteroidota
GTC
Asp
>WENV181672701
OGOO01000174
50727
Bacteroidota
TGA
Ser
>WENV181672839
OGOO01000360
50727
Bacteroidota
TGA
Ser
>WENV181672841
OGOO01000367
50727
Bacteroidota
TGA
Ser
>WENV181673272
OGOO01001744
50727
Bacteroidota
TGA
Ser
>WENV181673522
OGOO01004106
50727
Bacteroidota
TGA
Ser
>WENV181672661
OGOO01000131
132360
Bacteroidota
GGG
Pro
>WENV181672969
OGOO01000614
132360
Bacteroidota
GGG
Pro
>WENV181674443
OGOO01074472
132360
Bacteroidota
GGG
Pro
>WENV181672697
OGOO01000166
425638
Bacteroidota
CTG
Gln
>WENV181673021
OGOO01000743
425638
Bacteroidota
CTG
Gln
>WENV181672473
OGOO01000016
353927
Bacteroidota
TTC
Glu
>WENV181672474
OGOO01000016
353927
Bacteroidota
TTC
Glu
>WENV181673644
OGOO01005964
353927
Bacteroidota
TTC
Glu
>WENV181672526
OGOO01000032
23696
Bacteroidota
GCT
Ser
>WENV181673048
OGOO01000824
23696
Bacteroidota
GCT
Ser
>WENV181673330
OGOO01002110
414426
Bacteroidota
CTG
Gln
>WENV181673226
OGOO01001470
16224
Bacteroidota
GGA
Ser
>WENV181673376
OGOO01002413
16224
Bacteroidota
GGA
Ser
>WENV181673050
OGOO01000832
151960
Bacteroidota
GGC
Ala
>WENV181673322
OGOO01002057
151960
Bacteroidota
GGC
Ala
>WENV181673973
OGOO01015347
151960
Bacteroidota
GGC
Ala
>WENV181673337
OGOO01002165
16220
Bacteroidota
GGA
Ser
>WENV181672442
OGOO01000007
338125
Bacteroidota
CCT
Arg
>WENV181672771
OGOO01000251
338125
Bacteroidota
CCT
Arg
>WENV181673007
OGOO01000707
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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