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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181679279
OGOS01000152
235097
Bacteroidota
TTT
Lys
>WENV181679297
OGOS01000170
235097
Bacteroidota
TTT
Lys
>WENV181679588
OGOS01001276
95987
Bacteroidota
CAA
Leu
>WENV181679552
OGOS01001042
339412
Bacteroidota
GGT
Thr
>WENV181679228
OGOS01000060
235102
Bacteroidota
CGT
Thr
>WENV181680206
OGOS01022018
267954
Bacteroidota
GCC
Gly
>WENV181679350
OGOS01000278
243025
Bacteroidota
CAT
Met
>WENV181679601
OGOS01001348
97336
Bacteroidota
CAG
Leu
>WENV181680247
OGOS01026759
338155
Bacteroidota
CTC
Glu
>WENV181680029
OGOS01010383
58715
Bacteroidota
GAG
Leu
>WENV181679606
OGOS01001400
338486
Bacteroidota
CAT
Met
>WENV181679380
OGOS01000373
413663
Bacteroidota
CTG
Gln
>WENV181679381
OGOS01000373
413663
Bacteroidota
CTG
Gln
>WENV181679707
OGOS01002565
415410
Bacteroidota
TTG
Gln
>WENV181679341
OGOS01000253
136244
Bacteroidota
TAC
Val
>WENV181679342
OGOS01000253
136244
Bacteroidota
TAC
Val
>WENV181679553
OGOS01001042
237797
Bacteroidota
CCA
Trp
>WENV181680035
OGOS01010593
20893
Bacteroidota
GGA
Ser
>WENV181679621
OGOS01001607
412479
Bacteroidota
TTG
Gln
>WENV181679489
OGOS01000794
147147
Bacteroidota
GTG
His
>WENV181679490
OGOS01000794
147147
Bacteroidota
GTG
His
>WENV181680202
OGOS01021191
344692
Bacteroidota
GGT
Thr
>WENV181679473
OGOS01000725
338124
Bacteroidota
CCG
Arg
>WENV181679847
OGOS01005209
238121
Bacteroidota
CTT
Lys
>WENV181680417
OGOS01062626
126641
Bacteroidota
TAC
Val
>WENV181679198
OGOS01000036
338132
Bacteroidota
GCA
Cys
>WENV181679758
OGOS01003332
338132
Bacteroidota
GCA
Cys
>WENV181679548
OGOS01001009
37076
Bacteroidota
TAA
Leu
>WENV181679196
OGOS01000034
301449
Bacteroidota
CGG
Pro
>WENV181679298
OGOS01000170
144933
Bacteroidota
TCT
Arg
>WENV181680205
OGOS01021905
144933
Bacteroidota
TCT
Arg
>WENV181679599
OGOS01001348
303954
Bacteroidota
GCC
Gly
>WENV181680195
OGOS01020449
171336
Bacteroidota
GGC
Ala
>WENV181679330
OGOS01000243
144656
Bacteroidota
GTG
His
>WENV181679174
OGOS01000003
235207
Bacteroidota
CAT
Met
>WENV181679709
OGOS01002612
144596
Bacteroidota
GGC
Ala
>WENV181679398
OGOS01000450
80607
Bacteroidota
GTA
Tyr
>WENV181679255
OGOS01000105
113604
Bacteroidota
>WENV181679771
OGOS01003488
344769
Bacteroidota
CTC
Glu
>WENV181679772
OGOS01003488
344769
Bacteroidota
CTC
Glu
>WENV181679692
OGOS01002419
80614
Bacteroidota
>WENV181679384
OGOS01000391
52358
Bacteroidota
TGA
Ser
>WENV181679438
OGOS01000588
52358
Bacteroidota
TGA
Ser
>WENV181679587
OGOS01001272
52358
Bacteroidota
TGA
Ser
>WENV181679755
OGOS01003306
52358
Bacteroidota
TGA
Ser
>WENV181679896
OGOS01006116
52358
Bacteroidota
TGA
Ser
>WENV181679272
OGOS01000131
52358
Bacteroidota
TGA
Ser
>WENV181679230
OGOS01000061
154643
Bacteroidota
CAT
Met
>WENV181680398
OGOS01056346
175704
Bacteroidota
TGC
Ala
>WENV181679280
OGOS01000152
95559
Bacteroidota
TAG
Leu
>WENV181679310
OGOS01000192
419272
Bacteroidota
CTG
Gln
>WENV181679698
OGOS01002475
144655
Bacteroidota
GGC
Ala
>WENV181679374
OGOS01000353
95875
Bacteroidota
TAG
Leu
>WENV181680187
OGOS01019599
240012
Bacteroidota
CCC
Gly
>WENV181679277
OGOS01000148
44852
Bacteroidota
TAA
Leu
>WENV181679344
OGOS01000254
44852
Bacteroidota
TAA
Leu
>WENV181680428
OGOS01066676
280513
Bacteroidota
TTT
Lys
>WENV181679445
OGOS01000611
150485
Bacteroidota
GTT
Asn
>WENV181679623
OGOS01001608
150485
Bacteroidota
GTT
Asn
>WENV181680204
OGOS01021477
411550
Bacteroidota
CTG
Gln
>WENV181679283
OGOS01000161
196394
Bacteroidota
GTC
Asp
>WENV181679638
OGOS01001875
196394
Bacteroidota
GTC
Asp
>WENV181679244
OGOS01000077
132360
Bacteroidota
GGG
Pro
>WENV181679762
OGOS01003366
425638
Bacteroidota
CTG
Gln
>WENV181679519
OGOS01000881
353927
Bacteroidota
TTC
Glu
>WENV181679520
OGOS01000881
353927
Bacteroidota
TTC
Glu
>WENV181680246
OGOS01026759
23696
Bacteroidota
GCT
Ser
>WENV181679515
OGOS01000866
414426
Bacteroidota
CTG
Gln
>WENV181679311
OGOS01000192
16220
Bacteroidota
GGA
Ser
>WENV181679271
OGOS01000130
338125
Bacteroidota
CCT
Arg
>WENV181679809
OGOS01004217
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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