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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181692426
OGPA01000099
119661
Verrucomicrobiota
CAA
Leu
>WENV181692428
OGPA01000105
155256
Verrucomicrobiota
TCT
Arg
>WENV181692992
OGPA01002357
246701
Verrucomicrobiota
TTT
Lys
>WENV181692616
OGPA01000467
345141
Verrucomicrobiota
TTG
Gln
>WENV181692578
OGPA01000367
345133
Verrucomicrobiota
GAC
Val
>WENV181692519
OGPA01000248
82054
Verrucomicrobiota
GTA
Tyr
>WENV181692605
OGPA01000428
246677
Verrucomicrobiota
CTT
Lys
>WENV181692697
OGPA01000701
344844
Verrucomicrobiota
GCA
Cys
>WENV181692468
OGPA01000168
155264
Verrucomicrobiota
GGG
Pro
>WENV181692569
OGPA01000350
344845
Verrucomicrobiota
CTG
Gln
>WENV181692435
OGPA01000112
128202
Verrucomicrobiota
GTC
Asp
>WENV181692488
OGPA01000202
128202
Verrucomicrobiota
GTC
Asp
>WENV181692784
OGPA01000984
414625
Verrucomicrobiota
CCC
Gly
>WENV181692887
OGPA01001532
46246
Verrucomicrobiota
TGA
Ser
>WENV181692325
OGPA01000033
97755
Verrucomicrobiota
TAG
Leu
>WENV181692550
OGPA01000300
246700
Verrucomicrobiota
TTC
Glu
>WENV181692698
OGPA01000701
246700
Verrucomicrobiota
TTC
Glu
>WENV181692535
OGPA01000264
246687
Verrucomicrobiota
CGC
Ala
>WENV181692491
OGPA01000212
344841
Verrucomicrobiota
CAC
Val
>WENV181692582
OGPA01000374
60880
Verrucomicrobiota
CAG
Leu
>WENV181692495
OGPA01000217
82056
Verrucomicrobiota
TAA
Leu
>WENV181692604
OGPA01000428
344842
Verrucomicrobiota
CGT
Thr
>WENV181692542
OGPA01000274
170105
Verrucomicrobiota
CAT
Met
>WENV181692534
OGPA01000264
345123
Verrucomicrobiota
TGT
Thr
>WENV181692324
OGPA01000033
345110
Verrucomicrobiota
CCT
Arg
>WENV181692551
OGPA01000300
344839
Verrucomicrobiota
GTG
His
>WENV181693268
OGPA01005398
7274
Verrucomicrobiota
CGA
Ser
>WENV181692496
OGPA01000217
246260
Verrucomicrobiota
>WENV181692606
OGPA01000428
155268
Verrucomicrobiota
CGG
Pro
>WENV181692548
OGPA01000297
246728
Verrucomicrobiota
GAA
Phe
>WENV181692497
OGPA01000217
7256
Verrucomicrobiota
GCT
Ser
>WENV181692587
OGPA01000387
345115
Verrucomicrobiota
CAT
Met
>WENV181692993
OGPA01002364
345119
Verrucomicrobiota
TAC
Val
>WENV181692544
OGPA01000277
345124
Verrucomicrobiota
GTT
Asn
>WENV181692487
OGPA01000202
368497
Verrucomicrobiota
GCC
Gly
>WENV181692691
OGPA01000692
345142
Verrucomicrobiota
CCG
Arg
>WENV181692552
OGPA01000300
246709
Verrucomicrobiota
CAT
Met
>WENV181692549
OGPA01000297
154693
Verrucomicrobiota
TGG
Pro
>WENV181692763
OGPA01000936
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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