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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181700538
OGPG01025436
155256
Verrucomicrobiota
TCT
Arg
>WENV181700531
OGPG01024785
246701
Verrucomicrobiota
TTT
Lys
>WENV181700544
OGPG01026605
345141
Verrucomicrobiota
TTG
Gln
>WENV181700414
OGPG01013107
246677
Verrucomicrobiota
CTT
Lys
>WENV181700736
OGPG01063023
155264
Verrucomicrobiota
GGG
Pro
>WENV181700671
OGPG01046397
414625
Verrucomicrobiota
CCC
Gly
>WENV181700550
OGPG01027313
246700
Verrucomicrobiota
TTC
Glu
>WENV181700452
OGPG01016831
246687
Verrucomicrobiota
CGC
Ala
>WENV181700670
OGPG01046397
419909
Verrucomicrobiota
TCC
Gly
>WENV181700614
OGPG01037156
344841
Verrucomicrobiota
CAC
Val
>WENV181700413
OGPG01013107
344842
Verrucomicrobiota
CGT
Thr
>WENV181700524
OGPG01023635
170105
Verrucomicrobiota
CAT
Met
>WENV181700504
OGPG01021038
345123
Verrucomicrobiota
TGT
Thr
>WENV181700668
OGPG01045583
7274
Verrucomicrobiota
CGA
Ser
>WENV181700615
OGPG01037369
246260
Verrucomicrobiota
>WENV181700632
OGPG01040440
82181
Verrucomicrobiota
AAG
Leu
>WENV181700500
OGPG01020488
345124
Verrucomicrobiota
GTT
Asn
>WENV181700634
OGPG01041469
368497
Verrucomicrobiota
GCC
Gly
>WENV181700383
OGPG01011191
246709
Verrucomicrobiota
CAT
Met
>WENV181700692
OGPG01052652
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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