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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181704050
OGPJ01069281
119661
Verrucomicrobiota
CAA
Leu
>WENV181704024
OGPJ01061858
155256
Verrucomicrobiota
TCT
Arg
>WENV181704115
OGPJ01091033
82054
Verrucomicrobiota
GTA
Tyr
>WENV181703860
OGPJ01036129
344844
Verrucomicrobiota
GCA
Cys
>WENV181703775
OGPJ01025769
46246
Verrucomicrobiota
TGA
Ser
>WENV181703905
OGPJ01042186
344842
Verrucomicrobiota
CGT
Thr
>WENV181703980
OGPJ01054557
345123
Verrucomicrobiota
TGT
Thr
>WENV181704118
OGPJ01091843
7256
Verrucomicrobiota
GCT
Ser
>WENV181704138
OGPJ01099150
345115
Verrucomicrobiota
CAT
Met
>WENV181703816
OGPJ01030581
17023
Verrucomicrobiota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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