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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181708361
OGPM01001253
235097
Bacteroidota
TTT
Lys
>WENV181707830
OGPM01000009
95987
Bacteroidota
CAA
Leu
>WENV181707916
OGPM01000073
339412
Bacteroidota
GGT
Thr
>WENV181708929
OGPM01014738
235102
Bacteroidota
CGT
Thr
>WENV181708091
OGPM01000284
267954
Bacteroidota
GCC
Gly
>WENV181708171
OGPM01000463
267954
Bacteroidota
GCC
Gly
>WENV181708025
OGPM01000190
144657
Bacteroidota
CGG
Pro
>WENV181708147
OGPM01000406
243025
Bacteroidota
CAT
Met
>WENV181709122
OGPM01044981
126966
Bacteroidota
TAC
Val
>WENV181708309
OGPM01000927
97336
Bacteroidota
CAG
Leu
>WENV181708587
OGPM01003467
338155
Bacteroidota
CTC
Glu
>WENV181708914
OGPM01014086
153993
Bacteroidota
GAT
Ile
>WENV181708827
OGPM01008869
339341
Bacteroidota
GGT
Thr
>WENV181707836
OGPM01000012
343138
Bacteroidota
CCT
Arg
>WENV181707895
OGPM01000046
58715
Bacteroidota
GAG
Leu
>WENV181708630
OGPM01003967
46165
Bacteroidota
TGA
Ser
>WENV181708732
OGPM01005589
17323
Bacteroidota
GGA
Ser
>WENV181709017
OGPM01024071
24174
Bacteroidota
GCT
Ser
>WENV181707845
OGPM01000017
338486
Bacteroidota
CAT
Met
>WENV181708503
OGPM01002485
338486
Bacteroidota
CAT
Met
>WENV181708316
OGPM01000950
413663
Bacteroidota
CTG
Gln
>WENV181708317
OGPM01000950
413663
Bacteroidota
CTG
Gln
>WENV181707985
OGPM01000140
415410
Bacteroidota
TTG
Gln
>WENV181708451
OGPM01001913
415410
Bacteroidota
TTG
Gln
>WENV181708524
OGPM01002705
415410
Bacteroidota
TTG
Gln
>WENV181708263
OGPM01000730
136244
Bacteroidota
TAC
Val
>WENV181708264
OGPM01000730
136244
Bacteroidota
TAC
Val
>WENV181707917
OGPM01000073
237797
Bacteroidota
CCA
Trp
>WENV181708977
OGPM01018816
59689
Bacteroidota
CAG
Leu
>WENV181708009
OGPM01000155
20893
Bacteroidota
GGA
Ser
>WENV181708492
OGPM01002316
412479
Bacteroidota
TTG
Gln
>WENV181708900
OGPM01013022
344692
Bacteroidota
GGT
Thr
>WENV181707818
OGPM01000004
145504
Bacteroidota
TGT
Thr
>WENV181708994
OGPM01021562
341950
Bacteroidota
>WENV181708377
OGPM01001413
338124
Bacteroidota
CCG
Arg
>WENV181707930
OGPM01000083
235203
Bacteroidota
TTT
Lys
>WENV181708075
OGPM01000254
235203
Bacteroidota
TTT
Lys
>WENV181708628
OGPM01003967
238121
Bacteroidota
CTT
Lys
>WENV181708629
OGPM01003967
238121
Bacteroidota
CTT
Lys
>WENV181707919
OGPM01000075
126641
Bacteroidota
TAC
Val
>WENV181708617
OGPM01003782
338132
Bacteroidota
GCA
Cys
>WENV181708729
OGPM01005553
338132
Bacteroidota
GCA
Cys
>WENV181707974
OGPM01000122
37076
Bacteroidota
TAA
Leu
>WENV181707962
OGPM01000096
58714
Bacteroidota
CAA
Leu
>WENV181708046
OGPM01000210
235165
Bacteroidota
CCA
Trp
>WENV181707902
OGPM01000057
301449
Bacteroidota
CGG
Pro
>WENV181708400
OGPM01001511
301449
Bacteroidota
CGG
Pro
>WENV181708615
OGPM01003775
301449
Bacteroidota
CGG
Pro
>WENV181708102
OGPM01000332
144933
Bacteroidota
TCT
Arg
>WENV181708371
OGPM01001346
144656
Bacteroidota
GTG
His
>WENV181708280
OGPM01000808
235207
Bacteroidota
CAT
Met
>WENV181708281
OGPM01000808
235207
Bacteroidota
CAT
Met
>WENV181708311
OGPM01000929
235207
Bacteroidota
CAT
Met
>WENV181708748
OGPM01005963
144659
Bacteroidota
GTG
His
>WENV181708026
OGPM01000190
235180
Bacteroidota
CCA
Trp
>WENV181708828
OGPM01008869
235180
Bacteroidota
CCA
Trp
>WENV181708181
OGPM01000488
144596
Bacteroidota
GGC
Ala
>WENV181708613
OGPM01003744
144596
Bacteroidota
GGC
Ala
>WENV181708345
OGPM01001148
80607
Bacteroidota
GTA
Tyr
>WENV181708473
OGPM01002140
80607
Bacteroidota
GTA
Tyr
>WENV181708128
OGPM01000375
113604
Bacteroidota
>WENV181708131
OGPM01000375
113604
Bacteroidota
>WENV181708396
OGPM01001487
344769
Bacteroidota
CTC
Glu
>WENV181708397
OGPM01001487
344769
Bacteroidota
CTC
Glu
>WENV181708287
OGPM01000818
16999
Bacteroidota
GGA
Ser
>WENV181708352
OGPM01001199
80614
Bacteroidota
>WENV181708037
OGPM01000204
52358
Bacteroidota
TGA
Ser
>WENV181708245
OGPM01000661
52358
Bacteroidota
TGA
Ser
>WENV181708348
OGPM01001162
52358
Bacteroidota
TGA
Ser
>WENV181708474
OGPM01002149
52358
Bacteroidota
TGA
Ser
>WENV181708967
OGPM01017620
52358
Bacteroidota
TGA
Ser
>WENV181708339
OGPM01001072
154643
Bacteroidota
CAT
Met
>WENV181708533
OGPM01002857
95559
Bacteroidota
TAG
Leu
>WENV181708134
OGPM01000381
419272
Bacteroidota
CTG
Gln
>WENV181708338
OGPM01001062
144655
Bacteroidota
GGC
Ala
>WENV181707817
OGPM01000004
144639
Bacteroidota
GGC
Ala
>WENV181707837
OGPM01000012
338164
Bacteroidota
TTC
Glu
>WENV181708115
OGPM01000348
95875
Bacteroidota
TAG
Leu
>WENV181708333
OGPM01001010
151121
Bacteroidota
CAT
Met
>WENV181707839
OGPM01000014
240012
Bacteroidota
CCC
Gly
>WENV181707838
OGPM01000014
147439
Bacteroidota
TCT
Arg
>WENV181708050
OGPM01000220
280513
Bacteroidota
TTT
Lys
>WENV181708078
OGPM01000268
150485
Bacteroidota
GTT
Asn
>WENV181708079
OGPM01000268
150485
Bacteroidota
GTT
Asn
>WENV181707873
OGPM01000036
411550
Bacteroidota
CTG
Gln
>WENV181708448
OGPM01001884
19528
Bacteroidota
GGA
Ser
>WENV181708063
OGPM01000237
196394
Bacteroidota
GTC
Asp
>WENV181708064
OGPM01000237
196394
Bacteroidota
GTC
Asp
>WENV181708210
OGPM01000542
132360
Bacteroidota
GGG
Pro
>WENV181708291
OGPM01000859
132360
Bacteroidota
GGG
Pro
>WENV181709144
OGPM01050921
132360
Bacteroidota
GGG
Pro
>WENV181708161
OGPM01000435
425638
Bacteroidota
CTG
Gln
>WENV181708217
OGPM01000557
425638
Bacteroidota
CTG
Gln
>WENV181708277
OGPM01000799
425638
Bacteroidota
CTG
Gln
>WENV181708584
OGPM01003447
425638
Bacteroidota
CTG
Gln
>WENV181708279
OGPM01000808
239647
Bacteroidota
TTT
Lys
>WENV181707958
OGPM01000093
353927
Bacteroidota
TTC
Glu
>WENV181707959
OGPM01000093
353927
Bacteroidota
TTC
Glu
>WENV181708298
OGPM01000891
353927
Bacteroidota
TTC
Glu
>WENV181707961
OGPM01000095
185921
Bacteroidota
GTC
Asp
>WENV181708206
OGPM01000536
23696
Bacteroidota
GCT
Ser
>WENV181708586
OGPM01003467
23696
Bacteroidota
GCT
Ser
>WENV181708357
OGPM01001222
414426
Bacteroidota
CTG
Gln
>WENV181708426
OGPM01001720
16224
Bacteroidota
GGA
Ser
>WENV181709075
OGPM01034181
151960
Bacteroidota
GGC
Ala
>WENV181708875
OGPM01011315
16220
Bacteroidota
GGA
Ser
>WENV181708124
OGPM01000369
338125
Bacteroidota
CCT
Arg
>WENV181707967
OGPM01000102
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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