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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181713405
OGPQ01020201
235347
Actinomycetota
GGC
Ala
>WENV181713184
OGPQ01007833
235153
Actinomycetota
CCT
Arg
>WENV181713607
OGPQ01054163
235092
Actinomycetota
CCG
Arg
>WENV181713553
OGPQ01038315
158720
Actinomycetota
ACG
Arg
>WENV181713338
OGPQ01015592
245301
Actinomycetota
GCC
Gly
>WENV181713299
OGPQ01013113
174149
Actinomycetota
GAT
Ile
>WENV181713300
OGPQ01013113
235174
Actinomycetota
TGC
Ala
>WENV181713436
OGPQ01022656
356045
Actinomycetota
GAC
Val
>WENV181713417
OGPQ01021075
153948
Actinomycetota
GGG
Pro
>WENV181713437
OGPQ01022656
235199
Actinomycetota
CAC
Val
>WENV181713247
OGPQ01010219
44862
Actinomycetota
CGA
Ser
>WENV181713589
OGPQ01048353
367535
Actinomycetota
CTG
Gln
>WENV181713480
OGPQ01028495
144700
Actinomycetota
CAT
Met
>WENV181713438
OGPQ01022762
238473
Actinomycetota
GTG
His
>WENV181713545
OGPQ01037248
144636
Actinomycetota
GAT
Ile
>WENV181713588
OGPQ01048353
295695
Actinomycetota
CTC
Glu
>WENV181713293
OGPQ01012893
98279
Actinomycetota
GTA
Tyr
>WENV181713282
OGPQ01012187
53078
Actinomycetota
GGA
Ser
>WENV181713572
OGPQ01043199
235348
Actinomycetota
CCT
Arg
>WENV181713595
OGPQ01050232
144595
Actinomycetota
CAA
Leu
>WENV181713593
OGPQ01049904
431657
Actinomycetota
CCC
Gly
>WENV181713618
OGPQ01059299
235121
Actinomycetota
CGT
Thr
>WENV181713510
OGPQ01031824
80622
Actinomycetota
CAG
Leu
>WENV181713387
OGPQ01018875
243162
Actinomycetota
GTT
Asn
>WENV181713273
OGPQ01011533
144660
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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